Genomic Feature

zf2209

ID
ZDB-ALT-200225-15
Name
zf2209
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Cao Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
Insertion
Variant Location
Chr 7: 41229545 - 41229546 (GRCz11) (1) Details
Nucleotide change
-/A
Variant Notes
c.2114insA
p. Q706fs*6
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGGATCATCAACAGTTTTGACGCAAACATCTCTTCTATTCTCATCATTTTAGTTTGGAAACCATTTTCAATGTGCAGATTTTCTTGCATTTACAGCCTACTGTGCACTTTGCTGAAGAGCCCATCATCCGTGGTGGTGATGAGGACGACGATTATGATAATGACGATGATGACGCTGAAAGGAGTGACGAGGTGTCTCAAACGCCATCTTTTCCTGCCGAGAAACAGCGGCTCATACGTAAAGACACACCACACTACAAAAAGCACTTCAAGATCACCAAGCTGCCCAAACCAGAGACAGTCGCCGCCCTGCTGCAAGGCTTCAGTCATGATGGCCTGTCACCTACTGCTCACACCCCTGAGAACGAGAGGGATGGAGAGGATGACGAGGAAGAGGAGGAGGATGAAGACGAGGAGGACGATCTCCATACTCCTTTCCAGCACAGACTAGATGCAGCAGAGCTAGAAGACATCAGAATGAGTCAGATGAACTCGTCCCTGC
-/A AGCCAGTGAAGGTAAGAAAGGCTGAATTCTACTAAGGATAGACAAGTCTCTGATGAAATTAATTTTTGTTTCTGATGATTTATGCTATAGAGGTGTTTAACAGCCATGCAGAATCTTTTTAATTCAAGATATAAAATATACAGGGCTGAAAGTCCCGCACTAGCCTACAAGTTTAAGTGAATCAATTGTGATATTTAAAAAATAAATAAATAAAGAACAGTAAAGTTGTGAAGTATTTCACTTTTTAAATAAAGTTTTACTTGATGAATAACGTGAATTGTCTTATGCAGTACATTTCAGTCTACGGCTGCACAATACATACTGTTTCGGCATTGATATGTGTGAATCTGCTATAGTCATATTGCAGGATCTGCAATGTTTGGTATTATAAATAGGGTTGGGATTATAATTAACCTTAAAACACAATTCAGAAAGTGATTTGTGAAGTCGTTGAAAAGTTTAACTCTAAAAATATGCAAGTATTTTATTTGGATGGGTTTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
scribzf2209/zf2209Homozygous♀+/- ♂+/-Fig. 3 from Xu et al., 2018
scribzf2209/+ + MO3-pkd2ComplexFig. 7 from Xu et al., 2018
scribzf2209/zf2209 + MO3-pkd2ComplexFig. 7 from Xu et al., 2018
1 - 3 of 3
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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