Genomic Feature

tsu4cd

ID
ZDB-ALT-200206-2
Name
tsu4cd
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Meng Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 13
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 30806656 - 30806659 (GRCz11) (1) Details
Nucleotide change
CACA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TATATATATATATATATAATACATATATTTTACAATACAATACTCACTGATATCCCCAATAATATCTAAATTTATCATAATATAACTTCTAATCTTGATGTCAGAAGTTTCAGTTTCCATAGAGGACCTATGCCTCAGCCTCTCTGAAAACTGTGCTGGTTGTTATTAAAGAGTGTTGCAATAGTGAGTTTGGAGCACAGATCTATTACATAATAGATTTCGAAAATTTGACCCAAAAGTTTCATTTTTAGTCAAGGATGCTGTTCCGTTTTACAGCACACATCTGTGGTGTGATTAAACATGATTATTTGTATTTATGGCCCTTCTCATTATTCCATCCAACGTTCACATGCACTGAATTAAAAGCATCAAGGAAACAGCTGAACTGAGTTTCTCTTAATTCTTCTCCAGCCAAGCCCATCAGCCTGGTAGAGAGATGCTGGTGCCGTTCCACAGTCAACACAGTCCCACAGAGAAGCATTCGCGAGCTCAAGTTCCTC
CACA/- CACCCAACTGCCCCTTCCAAGTCATGTGAGTATCTGCACTTTCCTTCTCGCTCAGCAGCTCTTAACAGCGCATCACCTCACCCCATCAATCTCCAAACACTGAATGGGCCAGGAATTGGCATTATACTGTCGGACAGGCTCTCACAATTACACACATCCAAGAAATGCTATGGGAGGGGGTAGGAGCTTTAAGCATGGATGCATTTGTATTTTGTACAGGAAACCAGCAAAATGAGGTCCAAAAGATTCTTCTTTCTCACACATGTAAAGGAATTGTGCTTAGTCAGACACACACACAAATGAAGCATTGATGTTACTTTATGTAATTATGATCAACTTTTCTAATTAATTCAGACAAATAGAATCCATGAGTGAGATTCATTTTAAACCAATGAGATTGTTTCAACAAACGACACTTTTATTTAATTGATCTTACCTTGAACACAGCTTATTTTCTAAATCAATCAATTTTAATCACTTAATCTGGACAATCAGAATGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cxcl12atsu4cd/tsu4cdHomozygous♀+/- ♂+/-Fig. S5 from Jiang et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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