Genomic Feature

ihb348

ID
ZDB-ALT-190612-1
Name
ihb348
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Zhan Yin Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 13
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 2523779 - 2523794 (GRCz11) (1) Details
Nucleotide change
GACCACCATCTGCAGC/-
Variant Notes
16bp of "GACCACCATCTGCAGC" deletion from position 150bp exon2 of wild-type lhb  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
None
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GTAAAGTTAGGGTAATTAGGCAAGCCATTGTATAACAGTGGTTTGCTCTGGAGACAATCCAAAACTAATATTGCTTAAAGGGGCTAATAATATTGAGCTTAAAATGAGTTTAAAAAAAAGCTAAAAACGGCTTTTATTCTTGCCGAAATAAAACAAATAAGACTTTCTCAAGAAGAAAAAATATTATAGGAAATACTGTGAAAATTTCCTTGCTCTGTTCAACATCATTTGGGAAATATTTAATAAAGTAAATTCACAAGAGGGCGAATAATTCAGACGTCAACTGTTTTCTTATTTGTTTATTATTGGGGCTTTGAGGTCAATTTAATTGTTGTTTCTTCATTCTCCAGGATGTTATTGGCTGGAAATGGTGTCTTCTTTCTCTTCTCTTTGTTTTTCCTGCTGGCGGCTGCTCAGAGCTTGGTTTTTCCACGCTGTGAGCTAGTAAATGAGACGGTATCGGTGGAAAAAGAGGGCTGTCCAAAATGCCTGGTGTTTCA
GACCACCATCTGCAGC/- GGCCACTGCGTAACAAGGGTGAACACATTTGGGAAAACATTTTTTTTGTGTAGTATCACAGTCATTGTCACAGCAAGATCGCCGGTTCGAGTCCAGGCTCGGCCAGTTGGCATTTCTGTGTGGAGTTTGTATGTTCTCCCCGTGTTGGTTTCCTCCAAGTGCTCTGATTTCCCCCACTGTCACATACACATGCGCTATAGGGAATTGGATAAGCTAAATGGCCTTAGTGTATGAGTGTGTGTGTGTGTGTGTGTGTGTGAGAATGAGTGTGTATGGGTGTTTCCCAGTACTGGGTTGCGGCTGGAAGAGTAAAACTTGTTGGCAGTTCATTCTGCTGTGGTGATCCCTGATGAATAAAGGAACTAAGCCGAAGGAAATTGATTGAATGAATATTTCTTTTATGTTGTCCCAACACAAATTGATGGTGTGGGACCCAACATTTTCTACAGGGTTCCACCCAGTTACTTCCTGTTGTCATTCATTTTCTTTTTGGCTGAGTC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
lhbihb348/ihb348Homozygous♀+/- ♂+/-3 figures from Shang et al., 20192 figures from Shang et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations