Genomic Feature

hg91

ID
ZDB-ALT-190226-1
Name
hg91
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sood Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 24090426 - 24090432 (GRCz11) (1) Details
Nucleotide change
CCGTGGT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 5 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation: Ser>Phe at position 38 (1)
Sequences
Flanking Sequence
TTATTTGAATATCTTCTGTAGACCACAAAAATTAAAATAAATAAATGAATAAATACTGGCCATTGTCATTTTTCGTATTCTTTTACTATGGATATCAGTGGCCACCAATTTTAAACTTTCTTCAAAATATCTATTATGTTAACAAAAAACAGCAACGTTGGAGCCACTTGAGGTTGAGTAAATTTTAATTTTGGGGTGAACTATCTCTTTAAAGCACCAGTACTAAGGAATACCCCAGTCAATAATATCTCATATTTAATCTGCTTTCTCATTAATTTTAGTCATGATTCTTACATTAACTTGTTTAGTTTCTACCGATACTAATAAAAACTGCTTGGATGGATTATTGAACTTTTTTTTTTAAGTGCTAAACTATAACAACTGGGTGAAACTTATTTTTTTGTAATTGCAGTATTCACCGGACCTGAATAAACTCTTCTGTCAGCTGGCAAAAACTTGCCCCGTTCAAATGGTGGTGGACGTTGCCCCTCCACAGGGCT
CCGTGGT/- TCGAGCCACTGCCATCTATAAGAAGTCCGAGCATGTGGCTGAAGTGGTCCGCAGATGCCCCCATCATGAGCGAACCCCGGATGGAGATAGTACAGACATTTTTTTTTCCATATCCATTCTTGCATCATTCTAGGCCTGCACTATTAATTGATTTTAAACCAAAATGACGATTTGAAAAGGTGTGTTTTTTTTTTGTTGTTTTTTGCCAGAAACTGTGATTATTTTGTTTATTACTATGGCGAGGGAGGCAAGTGTGTGTAATTAAAACGATCCAACTAATGTTAGTTAAAAAGCAAACAACCGTTACAGCAGACCCCCAAACCAATATGTGGAGATGAAATGAAAGCTGCTAACTTCATTTCTGCTCTGCTTCTCTCGTTCACTCTCTTGTTTTGGCTGTTACAGTGATTCTTGTGGATCCACACACGCACACGAGCACAATTTTATATATAGTTTTAGTTAAATTTAAAATACTTTAGTTATTTTCTTAATTTGTCATG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations