Genomic Feature

zf2046

ID
ZDB-ALT-190220-5
Name
zf2046
Synonyms
  • uq1mf (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 65798184 - 65798386 (GRCz11) (1) Details
Nucleotide change
TGTGCAGAGATAGAGCGTGTGGACAGACACCCAACGCGCATGCAATGCACCGCAGAGCTGTAGCTGCAGGACAGTTCCCTTACGGCCTTTGTTTTTGGCTGCATAATCACAAACAGGAAGTTTCTTTGGGCCAGTCGCACAGAGGTACTTCCCCCTTTTGTTTGTTGGAGGTTGTGTGAAAGTTTGTGGTACAGACCCCACGT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
203 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AGAAAAAAGAAACTACTACAATGTCCTATTGTGGATCTATTGTAGTCTGATAGCTTCCTTAGTGAATCAGCGATTGATTTATGCATCCTGCTACTCTGGACTCTTCTCACAATAGACGTCTGGCTTCTTATGTGTCTCAATATAAGAACGATTTCAGATAGATGCAGAGCTTGCACTGAGAATGACTGAATTAAAGAGTAAAAATAAAACGTTAGCTAAACATTTTTGGGGGTTTTCGGAACTCCTTGCTTATTTTAATTTAGTTGTACCTCATGTTAATGGGATAGTTCACTTAAACTTAGCAAACATATACAAATCAGTTTACACAATGTAAAAGCATAAGCAAAATCCATTTCTCCCAATATTCAAGGTACTTGTCCATGTGCAGTTCTAATGAAAAAGCCATTAGCTGAACATTTTAACCCAAAAAATAACCAAAGACATGTTTAGCAGCTGTTTACTTGTCTGTTTTTGGAGAGTCCACAGCTGCTTCCCAGCAT
TGTGCAGAGATAGAGCGTGTGGACAGACACCCAACGCGCATGCAATGCACCGCAGAGCTGTAGCTGCAGGACAGTTCCCTTACGGCCTTTGTTTTTGGCTGCATAATCACAAACAGGAAGTTTCTTTGGGCCAGTCGCACAGAGGTACTTCCCCCTTTTGTTTGTTGGAGGTTGTGTGAAAGTTTGTGGTACAGACCCCACGT/- CGCCCCATTTCTCTTCATTCTCACCAATCCGCGAATGCATTTCTGATCATTTAAAGGGATAGTTCACGCAAAAAACAAACATTGTGTTATCATTTACTCACTCTGGACTGTTTCCAAAACATAGTTTATAATGTTATGTAATCAAGAAATCTTTAACCATTGACTTATACAGCAAAGTAGGTCAAGGTGTTCCAGGAATGGCCAGCCTAGTTATCAGACATGAACATTATTGAGCATGTCTGGGGTAAGATGAAGGAGGAGGCATTGAATCCAAAGGATCTAGATGAACTCTGGGAGTCCTGCAAGAACCAACCGAGGCTCATTGTGGAAACGTAGTCCCGCGGACGTTTCTGGGGACCGCGGAATACATCCCGGCGGGTACGTACGGCTGCAGTTTTTGTTTTTGCGAATCCGCGAGAGGCCGCTGTTGTGCGCTTTTTCGCATCTCAACCGCCTCCAGTTCGCGCAGTTAGCGCCCGCGCTGTTCACGCGTGAACCCA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
notch1bzf2046/zf2046; hu4624TgComplex
notch1bzf2046/zf2046; hu4624Tg + MO2-notch1bComplex
notch1bzf2046/zf2046; hu4624Tg; nz101TgComplexFig. 8 with image from Chiang et al., 2017Fig. 8 with image from Chiang et al., 2017
notch1bzf2046/zf2046; hu4624Tg; nz101TgComplexFig. 8 with image from Chiang et al., 2017
notch1bzf2046/zf2046; hu4624Tg; nz101Tg + MO2-notch1bComplexFig. 8 with image from Chiang et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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