Genomic Feature
nce16c
- ID
- ZDB-ALT-190211-3
- Name
- nce16c
- Synonyms
-
- tj16c (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one insertion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Fürthauer Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 12: 28507119 - 28507120 (GRCz11) (1) Details
- Nucleotide change
- -/TATAGCC
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp inserted (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
CTACCTAAATATTGTATGCCCTACATATTTTTATAGTAGGTGTTATCTTTATCAAGTTACAGAGATAAAATACCATATAAAGAATAGTAGACTTCCCTATCATGTATGTATCATGCTGTTATATTTCAATTAGCATGACCTGGCACTATTTTAATCTCCGCCCTAAATTTAACTTCTATCCCCATCCCTCGTGTGAAACTAAATCACAATGCATCATTCATTCACTCACTACTTGATTTTTCTTAACCATAGCTAAACAAGCATTTGTACAACTATGAAGTCCATCTCCATAAACAACATCAAACACTTGTGAAATGTTCAGAAGTTGTTAATTATAGCATTAAGCAGGCATGAAGAGCAGTGTGTCTTTAACATAACCCATCACTGCAGCAGAAATGAGAGAAACAGAAAGCTTTTGTTGAACGTACCTCTCCACCTCTGCTCTTTGGCTGGGATTGGTGATAGCAGCGATATATTGCATAATGTATTTACTAGCCTCTG
-/TATAGCC TTTTTCCAGCTCCACTCTCCCCTGCAAAATAAACAAATGACAATGAATACCTTATAGATATAAAATATAATTTGACTTTACTGTAACTTAAATAACTATAAGATTATGTGAAAAAAAATCGGAGACCATGTGAAAATGTATTTATTTAGCAGCATATTTTTATAGATTATATGCTTTAAAAAAAAGAATAAACATGTTTCTTTTAATAATGTAATATTTTTACATACCAGTGTCAGTGAAGAAATTATAAGAAAATTAAGAACAATATAAATAATGAATTAATTTCCTTTCTTTTCATAAATGTTAAATGCACAAGCATAAATATTATATATATATTAGTGCATTACACTGATTAACAATGACCATGTAACACTGAAGGCTATGACAATGATGCTGTATAACTGTAAATATAATATTATATTATTTCAGAAATTCCCAGAGATGGGTTGCGGCTGGAAGGGCATCTACTGCGTAAAAACTTGCTTATAAAGTTGGCGGTTC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| myo1dnce16c/nce16c | Homozygous | ♀-/- ♂-/- | 3 figures  from Juan et al., 2018 | ||
| myo1dnce16c/nce16c | Homozygous | ♀-/- ♂+/- | Fig. 1 from Kurup et al., 2024 | Fig. 2 from Kurup et al., 2024 | |
| myo1gnce18b/nce18b; myo1dnce16c/nce16c | Complex | Fig. 1 from Kurup et al., 2024 | Fig. 2 from Kurup et al., 2024 |
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Supplemental Information
- Genotyping protocol
- None
- Kurup, A.J., Bailet, F., Fürthauer, M. (2024) Myosin1G promotes Nodal signaling to control zebrafish left-right asymmetry. Nature communications. 15:65476547
- Juan, T., Géminard, C., Coutelis, J.B., Cerezo, D., Polès, S., Noselli, S., Fürthauer, M. (2018) Myosin1D is an evolutionarily conserved regulator of animal left-right asymmetry. Nature communications. 9:1942
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