Genomic Feature
swu45
- ID
- ZDB-ALT-181217-1
- Name
- swu45
- Synonyms
-
- Delta 11 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Huang&Ruan Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 18: 37355227 - 37355237 (GRCz11) (1) Details
- Nucleotide change
- TGGTGGCCGGC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 11 bp deleted in Exon 1 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
CAGACTTTATTTTACATTTCTTAATTACAAATCAAGAATGACATTTCACTTTTATTTGACTATTTATGACTTTCAGTAATATGCAATCGGCCTTTATTTTCCTGCATAAATGTATCTCTAAATACGATGTTTACAGTTCTTTAAGCATGCAAAAACAAACAAATAAAACTAATAAAAATATTTTAAATCTGTGACTGTGTCATTACAAACTATACGAAAATACTACGCAGTGACACTGCAGGCTGAAAGTGTGCATTGCCCCGGCGCCAGTTGCAGTGTCAGGCGCAGGAAAAGTTTGTGGAAACTGTTTGTGGTTTCTGAGGGGGTGGTCTCTTACTTGTCTGGAGTGGGACTTTGGCTCTGGCGGCGTGAAGAATGAGTCTGGCAGCTTTCTCAACCTCATCGGCACGGAAGGGGGGACGATGGTGTTTTTCGGGTTCATCACAGCGTTAAAAAGAGCCTCCAGATCGGTCTCGGAGTCTCCCCGAACATGGACGATC
TGGTGGCCGGC/- TGGAGGGTTGTGCTGGTTCGGATCCATGACTCCAGATAAAAGTAAAACTCTTCTTTCTATCCAACTGAAACCGTTTTCAAGGAAAGTCGGCTGCAACCATACAAATGGCGAAAATTTTAATCCAAAACAACCCAAAAAGATGTTCTGTGTCCGGCCGCTTTATCAATTATCCAAGCCTTGCGAAGGAAAAAAATTGGCAACGTTGTGTTTTGCTGCTTGCCAAAAACACCCAAATAAATGTGGAAACGCGCATATCTACAAAACTGTATCTCTAAAACTTTTTCTAAGGTGTCTAAACTTTCTAAAATCGTTGTCTGTGTTGCTTTTCCAGTAGTTTACGGCTCTTCTAACGCAGGCATTGGTAGTGACTGTACTGCGCATTGAAAATCACAGCCCTCTCACTAACCTAACTAACTTTTTTTTCTCTTCTTCCAACTTCTGAAACTTTGGGCAGGACATCAAACTTTATGAGTCATGTGACCGCTGACTCAGAGGGGCGG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| yap1swu45/swu45 | Homozygous | ♀+/- ♂+/- | Fig. 2 from Yi et al., 2018 | ||
| wwtr1swu46/+; yap1swu45/swu45 | Complex | 2 figures from Yi et al., 2018 | Fig. 3 from Yi et al., 2018 | ||
| wwtr1swu46/swu46; yap1swu45/swu45 | Complex | Fig. 2 from Yi et al., 2018 |
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Supplemental Information
- Genotyping protocol
- None