Genomic Feature

imm003

ID
ZDB-ALT-181115-3
Name
imm003
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Leonor Saude Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 45008440 - 45008539 (GRCz11) (1) Details
Nucleotide change
AAATGACGGATCTGTCCGGCACGGAGTTTGAGATCGACGTGGAGGGCCTGGAGACGGAGAGCGATGATCAGGCGGTGTTCACCGGCCCCGGAGAGGACGA/-
Variant Notes
This allele lacks the 3’end of the 5’UTR, the start codon and part of the first  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
100 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TCTCATCACACCGCAGTGACAGATCAGGTTGTCTAAATGTCGCTCACTGATGTATAGGTAAAAGTGGTCTAACTTACCCTGGAGCAGCGCTTCTTATTGGTACAACAGCTCTGGGAAGCAAGAAAGACAAAAACCTCAGGTTTTAGTATTATTGCGACTTGGATATCCACTCATCGTTTGTTTGACTGCTTTGGCGAGGTAAGTGTATCTTAAAATATGCAAGAAACATACTATTTAAATTATACAGTACATTTCAGAGCATATATTTTTTTATTTGTTAACTTAAGGAATTAAATTACTTAAGTACAAATTTACCAGCTACAGTGATTCATTCACAAAAGTTTTTCAATTCACAATTTTTTTTGATTGATGCAAATTTGATTTTACTTTTTAAGTAAAATGACAGCATTTAACTTGACACGTTACATGCAGGAAAACATAGTTTTAAAAAAATAATTATTCGCATTTTTTTGGACAGCATCTTGCTTTACGCGGCCAGA
AAATGACGGATCTGTCCGGCACGGAGTTTGAGATCGACGTGGAGGGCCTGGAGACGGAGAGCGATGATCAGGCGGTGTTCACCGGCCCCGGAGAGGACGA/- CACGGGGTCCAAAGACGACGACAAATCTGACCGCTTAAATCTCGGCTCTGGAGACCAGCGCAAACTGAGCCGCACGCCGAAATGCGCCCGATGTAGGAACCACGGCGTTGTGTCTTGTCTAAAGGGGCACAAGAGGTTCTGCCGATGGAGAGACTGTCAGTGCGCAAACTGCCTGCTGGTGGTGGAGAGACAGCGCGTAATGGCTGCACAAGTGGCACTGCGGAGACAGCAAGCGACAGAGGTGAGTGCGCGCTAACTAATGATCCGGCCATTTGTTCCCATCAGTATTAAACTGAGGTAACAGAATATACACTCTTCAAAATAAAGGATAAAAAAAAGAAAGAAAGATTTACAGCGATGCCACTGAGGAATCATTTCTGGATTCAATTTTCAAAGACTGTTTTAAAAATCTTTTCCATCTATAAAGCACCACGAAAATGTTCCATGCATGGAAACAGTGATGCCTATAAAGAACCTTTATTTATAAGAGTGTATAAGCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations