Genomic Feature

um296

ID
ZDB-ALT-181024-13
Name
um296
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sagerström Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 1
Variants
Variant Type
Small Deletion
Variant Location
Chr 1: 338189 - 338192 (GRCz11) (1) Details
Nucleotide change
GCTC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AGAGTGCAACTTTCTGTCAAATGCATAGTAAGTAGACTGCACAGTGAACATCATCGAGTGCACACTAACTTGGAAGCAGCTTCCTTTCAAACGGAAAGTTTACTACACAGAGCACACTACCTAGGGAGCAGCAGGGAGTCGCTGGATGAAGCATTAGCGATGATGCAGTGCTGAATGTATTAGTTATGTCTGAGTTGGTGTAGTTAGTGAGAGTCTCACCGTCTCCGGGTCATTCTCGAACACTTCCCTCGCCTCCTCCTTAGTGCACTTCTCCTCCACACACTCCCTCTCCAGGTGGCCCTGTTTGGTCTCCTCGAACACCTGGTTGGCTCTGCGGGTTCTGCGCAGGAACTGGTGGGCCTGGCGCGAGGACACGGACACTGCGGACGGGACACACTCTCAGACTCGGACCGCTCCGGAGCTCCGGTCGATCGGTGTGCGGTACTTACCGGGAGAGCAGAAGCCCGAACACAGCAGGACGAGGCAGAAGCTCCACACCA
GCTC/- CCTCATGGCGGACAAACTGCGTCAAACTTTCGCTCTTCTGGGTCACAATGATCCCGCACTGAGCGCTGCATTCAACCCAGAGCCCAGCGAGCGAGTCTGTCTGCGGCGCACTCACATTCACACACACTCTCTCTCGCTCGATCTCTCATGCGCGCACACACACACTCTCTCTCTCTCTTTCTTGCTCAATGTGTTCGCCCTCTCTCGCTCATGCACACACACACACTCTCTCTCGATCTCTCCTGCATTGTGCATTTCTCTATATCCCCTGCTCTATTTATTCGCACACTCTCTCTCTGTCATGCACACACACACACACACACACACACACACACACTTTTTCTTTCATGCACACACACTCTCTCTTGCTTTTTTTGTACTTTAATTTATTTTACATAAATCATTCTGTATGTGGAAAATTTAAAACTAACTTGAAAGTATTATTATTATTAATATTATTATTGTTATTATTATTATTATTGTTGTTGTTGATATTATTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
gas6um296/um296Homozygous♀+/- ♂+/-Fig. 6 with image from Ghosh et al., 2018Fig. 6 with image from Ghosh et al., 2018
gas6um296/um296Homozygous♀-/- ♂-/-2 figures with image from Ghosh et al., 2018
gas6um296/um296; vu12TgComplexFig. 8 with image from Ghosh et al., 2018
1 - 3 of 3
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.