Genomic Feature

ncv117

ID
ZDB-ALT-180927-8
Name
ncv117
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Mochizuki Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 18
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 37355225 - 37355235 (GRCz11) (1) Details
Nucleotide change
TCTGGTGGCCG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTCAGACTTTATTTTACATTTCTTAATTACAAATCAAGAATGACATTTCACTTTTATTTGACTATTTATGACTTTCAGTAATATGCAATCGGCCTTTATTTTCCTGCATAAATGTATCTCTAAATACGATGTTTACAGTTCTTTAAGCATGCAAAAACAAACAAATAAAACTAATAAAAATATTTTAAATCTGTGACTGTGTCATTACAAACTATACGAAAATACTACGCAGTGACACTGCAGGCTGAAAGTGTGCATTGCCCCGGCGCCAGTTGCAGTGTCAGGCGCAGGAAAAGTTTGTGGAAACTGTTTGTGGTTTCTGAGGGGGTGGTCTCTTACTTGTCTGGAGTGGGACTTTGGCTCTGGCGGCGTGAAGAATGAGTCTGGCAGCTTTCTCAACCTCATCGGCACGGAAGGGGGGACGATGGTGTTTTTCGGGTTCATCACAGCGTTAAAAAGAGCCTCCAGATCGGTCTCGGAGTCTCCCCGAACATGGACGA
TCTGGTGGCCG/- GCTGGAGGGTTGTGCTGGTTCGGATCCATGACTCCAGATAAAAGTAAAACTCTTCTTTCTATCCAACTGAAACCGTTTTCAAGGAAAGTCGGCTGCAACCATACAAATGGCGAAAATTTTAATCCAAAACAACCCAAAAAGATGTTCTGTGTCCGGCCGCTTTATCAATTATCCAAGCCTTGCGAAGGAAAAAAATTGGCAACGTTGTGTTTTGCTGCTTGCCAAAAACACCCAAATAAATGTGGAAACGCGCATATCTACAAAACTGTATCTCTAAAACTTTTTCTAAGGTGTCTAAACTTTCTAAAATCGTTGTCTGTGTTGCTTTTCCAGTAGTTTACGGCTCTTCTAACGCAGGCATTGGTAGTGACTGTACTGCGCATTGAAAATCACAGCCCTCTCACTAACCTAACTAACTTTTTTTTCTCTTCTTCCAACTTCTGAAACTTTGGGCAGGACATCAAACTTTATGAGTCATGTGACCGCTGACTCAGAGGGGC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
lats2ncv108/ncv108; yap1ncv117/+ComplexFig. 3 with image from Fukui et al., 2018
wwtr1ncv114/ncv114; yap1ncv117/ncv117Complex2 figures with image from Fukui et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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