Genomic Feature
tup2
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 6: 11358709 - 11358710 (GRCz11) (1) Details
- Nucleotide change
- -/TGACCGGTCCTCTAGGT
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 17 bp inserted in Exon 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ACCTTTGGCCCACAGCCCTCAATCAGGTTTGCTTTTTTGGCCCTTCATATAAAAAAGTTTGGGCACCCCTAGTTTAAAGGAATAGTTCACTCTAAAACGAAAATTCTCACCATTTACTCACACACTTAAGCTAATATGATTTAAGTTAATGGCTTTTTTATTAAACATTCTTCAGTACATCTTCCTTTACATTCAACTAAAAAAATATATGGAGTGATATTTGAAAGAGTAAATGAGAGAATTTCCATGTGAAAAATATCAAGTTACATCTATTCTATAAAATAATTAATCAGCACCTGGGATACAAAAATAGCATACAGACTTTGAATGCATTGAGTTACACTTTTAATTTAACCAATAACTTTTCTGCTTTAACAAAGAAATGACAATTTAGTCAATTTAAGGAAAAACAATGCAGAACAAACCTCTATTGAGTATCCCTCGCTGATCTCTCCATGAAAATCTTGTGTTTGCGTGTCCTCTAGGTGGCGCTCTTCTGTT
-/TGACCGGTCCTCTAGGT GACCGGTCATTCGTTTGGACATTCTGGCCCTTCCTCTTCGCCGTCTTTTTCTGCGTGCTCGAACTTTCGCTTTTCGCCCGGCGCTGTCTAAAGTGAGCAAGCTGCGCCAGAGGTTGAGCGACAGGTAGAGAGAAACGTACGTCAGGATCACATAACAAGAACACAGAATCAGCATTTTGCTAGCCTCTAAACATGAGCCATGTCAAAGGTCAATTAGATGCATCCCCAGCTTGACAGATGCTTCACAAATAAACCAAACATGCGACAACTTCATCTAAATGGTTGATTTAGTCCATAAATATGAACAAAAACAGCAAAAAAAAAAAAGAAAGTTAAAAACTGATATCCAAATAGATGGTGTAGAAAAAATGATGGGTTCAGCTTCTAAAAAAAATCCCTCTTCCTTTTTTTAGAGAATCACTGATTCTCAAGCACAAAACATGGTTGAAGCTAGAAAAACACAATTCTGTGAGAGACGCTTCTCACAGCTGCCTTAAGAAG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| pcnttup2/tup2 | Homozygous | ♀-/- | Fig. 1  from Sepulveda et al., 2018 |
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Supplemental Information
- Genotyping protocol
- None
- Krishnan, N., Swoger, M., Rathbun, L.I., Fioramonti, P.J., Freshour, J., Bates, M., Patteson, A.E., Hehnly, H. (2022) Rab11 endosomes and Pericentrin coordinate centrosome movement during pre-abscission in vivo. Life science alliance. 5(7):
- Sepulveda, G., Antkowiak, M., Brust-Mascher, I., Mahe, K., Ou, T., Castro, N.M., Christensen, L.N., Cheung, L., Jiang, X., Yoon, D., Huang, B., Jao, L.E. (2018) Co-translational protein targeting facilitates centrosomal recruitment of PCNT during centrosome maturation in vertebrates. eLIFE. 7
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