Genomic Feature
sm11
- ID
- ZDB-ALT-180605-2
- Name
- sm11
- Synonyms
-
- smu8 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Yiyue ZHANG Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 21: 23014232 - 23014239 (GRCz11) (1) Details
- Nucleotide change
- CATGATCA/-
- Variant Notes
-
the truncated RB1 protein lacks all functional domains.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted in Exon 2 (1)
- Transcript Consequence
- Frameshift (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
CTTACTTTACAAATCTTTGGTAGAGGGCCAAAGTCACATCGTATTTGTTCTCTAGGCGGGTCACAGCAGAGTTCACTTTAGGACTTATTGTGTCTACATTTACATCCATCTTCCTCACAAGACTGATGAACTGCTTCACACTGCAAAGTAACGGCAACTTAGTGTGTATTAAAACCATCGCTAACACTTGAATACATTACACCACTCCTGAGAGGCAAAAATCAGGACTTAATTTCAATATCTGCCACACATACCTCAGACCAACTGCTTTCAGGAACTGCGTAAAAGTGAGGTTGATGCCTTCAAGCTCCATGCCAGCAATAAAAAGACAAGCTCCCCACTGCTGTCTGTTCGAATACGGCATCTAACATGGAAGACATGCAAGATAGTGTAATTACACATTTATAACCCAAAACACAAGTGCGGTAAAGCAGATATCAGAAGAAAGAGTACATTTGTCTTGTCCATCGATCTGATCTCCCTCTCCCATATTCTCCATG
CATGATCA/- CAGATGGAGTTAGTGGACTGGAGCTCCTCGCTGAGAAACACAAACTCAGGATCCTTGTCCTTGTGTCTGGAAAAACAACAGTTGACAGACATGGTTGACATTGCTTATACACATAAATAACTATTGTCAGCTTTTTTGCTATTAGGAGTTGCTCTTTAGTGTTTAGCAGTGGCATTTGCATTACATTACACTGAACTGAACTGAAATTTAACTCTGACAACTGAACTGATGCAGTTTTAATTTACTAGACATTCATATATATCGCAGCACTGTCCAGTTTAGTTCCAGCCCTGCTTCAACACACCTATTTGTAGGTATCAAACAAAACTAAAGCACTCAATTAGTAAGATCAGGTGTGTTTAATTAGGGTTGGAACTAAACTGTGCAGAGCTGCGGCCCTCCAGGAACAGAGTTTGACACCTGTGATCTATATTTAGCTGCTTTGACACAGTCTACATTGTAAAAAGTGCTATAGAAATAAAGATGAATTGAATTTAGAC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None