Genomic Feature
pr05
- ID
- ZDB-ALT-180515-3
- Name
- pr05
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Burdine Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 17: 4245057 - 4245076 (GRCz11) (1) Details
- Nucleotide change
- GATGTTTCCTCGTACCCCAT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 20 bp deleted at position 218 in Exon 1 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
CAGCAAAATGAATAATAATAAGAATAAAAGGATGTTTCATCCAATACACGCGTGTGTAACTGTGAATCAACTTGAATCGTGACACCAATAAAAGGCATGCAACTTGCATTTCTATGGTAACCTTGTGCACATAAATTTAAACATTCCTTGTGCACGTAAATGTTTTAAATTTAAACAATTGAGTGTTGATGGTGAAAAAAGAAATTCTATAAATTGTCCTTTCTTAATACATGGACTTGCTCAACATGTGATGGCTTCATATATATCCCCAATGACTCTTTATAAAAATGCATTTTCCAAATAAAATAAATAAATAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATGTAAACATTTTATTATAAATAAATAAATTATAAATAGTCACTTTTTAAGTGTGGTCCGTAAGATCCTCACCTTGATCCTGCATAAACCTCAC
GATGTTTCCTCGTACCCCAT/- ATTCAGACACCACACATGGGTCATTAACGGTCTGTTTGCTGGCCTGTTTAAAGATTTTCCACATCTGTGATGGCACTGCGGCATGATGCGATGGTTTGGGTCGACTCCAGAGTCCCATAGAGCTCAAAAACAGCTTTTCTTGCACAAGACCATCATCTTCTGCAGGAGAACAGAGACTGAGGGTCAGAAGACAGGCTCTGAGGAGGACCAAGAACATTATTAGATTATAAAAACAGAGCAAAGAACACACACAGGCTTATAAATGCCAGCTGATCAGCTTCACATGGCCAGAAATCCACATCTGCAAGCTGATTGGTGGAGATAAAGGAGTTGATTGATCAGCAGCAGGGGGTGGTGTCATTCACATGCAAATCAGCTCTTTGATGTTTATAGGCATCAGGTTGCCTGGCAGACACAGCTCTGATTTATTGCATGAAGATTTTGGGATCTGCAATGATTTAATAATTAAAATGAGTAGGGGAAAATGCTAAAAATGACTT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None