Genomic Feature

ouc3

ID
ZDB-ALT-180327-4
Name
ouc3
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Laboratory of Molecular Medicine
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 1
Variants
Variant Type
Small Deletion
Variant Location
Chr 1: 51212820 - 51212829 (GRCz11) (1) Details
Nucleotide change
CGCCGTTTCA/-
Variant Notes
Gene ID: 326718, Chr1, Position:50,559,185 - 50,576,166, exon 6 deletion  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted from position 50559185 to 50576166 in Exon 6 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation: at position 349 (1)
Sequences
Flanking Sequence
CTGATTCATTAAGAAATGAAGAGATTTTCTTTATTAATAGAATTTGTCACTGACTCAAAGATCCATTCAAAAGAGACTCACTTTCGAAATGATTCATTCATAAGAGCCAATTCAGTATGAAATTAAAAGAATCATCTTATGAATAGATTGAGCCATTGAATCAAACAATTTATTTAAAGCAGCTGATTCATTAAGAAATTAATTGATTCTCTTTAAGAATGCATTATCGAGTTAATGACTCATTCAATTCATTGCAATCAGCTGATTCATTAAGAAATGAAGAGGCTTGCTTGATGAATACATTGAGTTTTGATAAAAAAAAATAAAAAACAATTGTCATTTTAAACAAAAGTTTTGAGTGTGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTTAATGTAAGTTTCTGACCGCAGGTCAATCATGGAGCAGCTGGTCTCATACTCAATGCCGTCACACTCCTCGTAAATCTTCGA
CGCCGTTTCA/- GCAGAGTCACACTCCACCACGGCATAATAATACCTCAGACGCTTGAACTGATAGTCGCGCACTTTCTCTCTGTAGATCCTGAAAAACACACGAAAGACATTCATTGTACATCTCTGAACTGACTTACATGATACAAAAATTATGTTTAATATTTCAAAGGTTTAATATGTATATATATATATGGTTCACCCAAAATGAAAATTTCTTACTATTCACCTTAGTTTATCTTCAAAACACAATAGGAGATCCTCCCTCATCCTCTATACACAAGGTCCTGAGACGATCAAAGTTCAGAAAAGAAACCAAAAACATTGTCAAAACTTTGTTTGTGACTTCAGTGTTTCAACTGTAACCCCACTGCTAAAGAAACCCAACCTGGACCATACGCTACTTGAAAACTACAGACCAGTATCCCTGCTTCCATTCATGGCCAAGATTCTGGAGAAAGTAGTGTTCAATCAAGTCCTGGACTTTCTTACTCAAAACAATCTCATGGACAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
esf1ouc3/ouc3 (TU)Homozygous♀+/- ♂+/-4 figures from Chen et al., 20183 figures from Chen et al., 2018
esf1ouc3/ouc3; y1TgComplexFig. 6 from Chen et al., 2018
esf1ouc3/ouc3 + MO4-tp53ComplexFig. 9 from Chen et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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