Genomic Feature

sdu11

ID
ZDB-ALT-180305-3
Name
sdu11
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
De-Li Shi Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 10: 120526 - 120541 (GRCz11) (1) Details
Nucleotide change
CTGAGCGCCTGATCCG/-
Variant Notes
23 bp to 38 bp of the wildtype ripply3 exon1 coding sequence, CGGATCAGGCGCTCAG,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
16 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GCGATAGTGGAAACGCGGCTAGTGATATCTGTGCAGGAGCAGCAGGAGTGAGCAGGAGATGCTCTACTGTACAGCACTGCAGTTATTTGCATGTTTAATTCAACACTCCAGCTTTGCACATATATTTAATTCACTTCTTTGTATGAAAACACGGCTCCTGACTTCAACAGTGTTTGTTTTTCTACAACGCCAGTAAACGGGCTCAGGGTTATTACATGTTTCAAAACATCTTCTTTTGTGTTTAACAATAAAAGGAAACCTCTGACACCCCTTGAGGATGAGTAAACGATAACTGGTCATTTTTGGGTGAACTGCCCCTTTAAACTGAAATCCTCACACCACCAAACACCAAAGTTAAAGTTACCTTGTGTCCTCGAGCCTCTGTCGGGGAGAGACTCCACGGTCTCCATAGCACAGAACATCTATCAGAGCACAGAAAAACACCATTATTCACCCTTAAAACTTTAAATCATGAGGAGAAACTGATCTTAAACTCTTAC
CTGAGCGCCTGATCCG/- CGTCTACACACACCGGCAGCATCATCCACACTGCGCGCTCCCGACAAGCGCGCACGCTGATGAAGACGCGCGCACAATGGGCGTGTTCTGTGCGCGCCCGCCACTCTGACGTCACTTTATTAGATGATTATTAAGTTGAACATTGCATTGTCGGATCTCTTTGCCTGCTTGCACTGGATTTTGGATTGATATACTTGATGACATCGATTGCGAACAGTTTTGGCTAATCTAATCTAATCTAATAAAGCTGTAAAGTCTCAATCAAAATCATTCATAATTTTCACCCAATAAATACCAAACTAGCTAAATGTAATAACATTATTTCCCCTAATGCTCATGTTGTACTCAATATGATGAAACACTAAACCTTTTATGTCGGGAGTGTGCTTACTGTAGTGTTTTGGGTTGACTTTTCCAATTAAGTTATTAAAATAGGCTTAATAAATAAATAAAATAACGGGTAGGTATATTTGGTTGGGTAATAGGCTATGTGAAGCGTG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations