Genomic Feature

z35

ID
ZDB-ALT-171114-3
Name
z35
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Grunwald Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 42282325 - 42282331 (GRCz11) (1) Details
Nucleotide change
AGCTGCA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ATTTTCCTTCGGCTTAGTCCTTGTGTTCATCAGGGGTTGGTACAGCGGAGTAAACCGCCAACTTATCCAACATATTACACAGCGGATGCCCTTCCAGCTGCAACCCAGTACTAGGGAAGCACCCAGCCACACTCATTTACACATACACTATGGTCAATTTAGCTTATTCAATTCTGCTTAAATATCACATTTATGAAAATGTAAATGCTCAAATAGTGAAAAAAGGATTCATTTTTACACTTGAATTATAAATAAACCTTTGTGACATTGGTCCAGTGAAATATTAGTTTGCAAATATGTATTTATTTTCAAGCTGGAATAGTGTATTGATATATTTATGAATGTATAAAAAAGATGCTGTGAATCATTCATTTGCTGAATAGTTATGGGCTCATGGACTTCACAATCTCAATGCACATAATGGAGGATGCTGCAAATATGTGATGACTAATTGTTATGGTGTGTTTCCGGTGTGCTTTTATTTCAGACGGATGTTTCCC
AGCTGCA/- AAGTAACAGTGACAGGACTAAATCCAAAAGTCAAGTATGTGGTGATAATGGACATGGTGCCGTTTGATAACCACAAGTACAAGGTACCTCCCCTCCACACACACACACACACACACACACACACACACACACACACACACGGGCATATTTCTGTTTAACAGAGAGCAGATTTTCTCAACACATTTCTAAACGTAATAATTAAAAACTAATTTATAATAACTGATTTATTTTATCTTTGCCATGATGACAGTTAATAATATTTGACTAGATGTTTTTTAAGACACTTCTTTACAGCTTAAAGTGACATTTAAAGGCTTAACTAGGTTAATTAGGTTAACTGGGCAGGTTAGGGTAATTAGGCAAGTTATTGTATAACGGTGGTTTGTTTTGTAGACTATCAAAAAAAAAAAAAAAAAGATAAAATAAAGGGCTAATAAATTTTGACCTTAAATAAAAAAAAATGCTTTTATTTAAGCCAAAAGAAATCAAATAAGACTTTC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
tbx16lz35/z35Homozygous♀+/- ♂+/-Fig. 1 with image from Morrow et al., 2017
tbx16lz35/z35; tbx16b104/b104Complex2 figures with image from Morrow et al., 20173 figures with image from Morrow et al., 2017
1 - 2 of 2
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.