Genomic Feature

hg59

ID
ZDB-ALT-170809-25
Name
hg59
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sood Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 13
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 26772058 - 26772064 (GRCz11) (1) Details
Nucleotide change
GTCCACA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CATCAAATTCTCCAAATTTGCTCGCCAAGCTTACAATTAAATTTCATATTAAGAATTACAAATAAAATTAAACAAATGTCTCTTTAGTTTCATTTCTAAACATTTGAATCACACAAAATCTGCAGAAACTCTGGTCCAAGCCCCTCCCCTGGATAAACGTCAGTCTATATCAATCAATGATTGGCTCCTATACTACAAGGCAGGGCTTCATTTGTCGCAATGTCGTTACACTTTTCCCCATTCAAAACTATACGAGTGATATGTCTTGTGTATTCTATAGTTTTTGCTGATACCAAGCTAACCACATGTAGTCACCGTGAAATGTAGTTACATTTCTGAAAGGTACGCATCAGGGCACAGTGAAGCATATGCAACTTTGCGAAGGCTATATTGGACCTACTACTTCCTCACGTCAAATGCCAATTCTCAATAAGAAATACATTAATTATTAGGGCTAATTTGTTGTCTTTTATACCAACACCCAGAGCACCTTGGCCAAC
GTCCACA/- GCCAGTTCCTGTTAAACGTTGAGGCTCTGTCTGACTTTTGGTCAGTGCTGGATGAGATCGATGAGAAGACATGGGTGCTGGAACCAGAAAAGCCCACAAAAGCAGACTCCACCAGAAGAATCGCCATTGGTAACGTTACATTCCTATTACTACATTTGAATCTCATTACCAGCAGATCATCCACCATCCACAATGATTCCCTGTGATATTAAGCTGCCATATCACTGTTCTTCCTCAGGAAACAATGTCTCAATAAAGGTACAAATTGACCCCAGACACCCCAAAATGCTGCCGGAGTGCTGTTTGCTCGGGGCTGAGCACGGTAGGCATTTTTCATATCTGCAGATCTCTCTGTTTATCTCCATAGAGCTTTTATTACGCTTTCCTGCGTGTGAGAGGCAGCTCGGATGTGAAGACTCATGCCTCACTCTCGTGCTCTTGTTTTTCAATTACCTCCGTACATAAGTGCACATGCTGTAAATGCTTTACTGCATTTAGAC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
fanclhg59/hg59Homozygous♀+/- ♂+/-Fig. 5 from Ramanagoudr-Bhojappa et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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