Genomic Feature

yu27

ID
ZDB-ALT-170622-1
Name
yu27
Synonyms
  • No.6 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Seung Park Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
Delins
Variant Location
Chr 7: 41395007 - 41395012 (GRCz11) (1) Details
Nucleotide change
TGTAGA/ATATG
Variant Notes
The mutation contains a deletion of TCTACA followed by an insertion of CATAT in  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp inserted / 6 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
ACAGGGTTGGCCACCCCTGGCGTAGAGCATAATATGATACTACAGTATAGACTTTTTAATATATATTGCCATATTTCACAGCCCTAACTATCAATATATGTATAGAAATAACAGCATCAGCAGACATGCTTACAATTATCTGACTACCTTTTATTATGATATGTAGAGAACTATCCTGACATACCTCAGTTGGATAAACATCAAAGTCTCGAGTCAGATTCATACAATATATAAACAAAAGAACTCACTTTGATTAGAAGATCTAAAGCAGGATTTCTGCACTTTGCAGATTTGTCCTTTGTGTAAACGACAATGCACGTGTCCTATTCACGCAGAGAGAAACAAAAAAAAAAAATCAAGCAAATTAAACTAGTGCAACAAAGATGACATGTCAGTGCTGGCAGTCACATTAATTCACATTAATTAAACGATAGGATAAAGGTACCTTAAGCTCGACAGCATAGTTCTTTTCCCATCCTCGGACAGTGGCTGACATTCTC
TGTAGA/ATATG AATGCCCCTAAGAAATTCATAATCTCCACTCTCGTTTCCCGCAGAATCTCCACTCCTGTAGTCCCCAGCTGCAGAAAATCCATTTAAGCAATTTCATATTAATAAAATTAGATTGCAATCTGGTAAATCCTTCTGAAATAATATAAATGTCATTTATTAGTTAAATTCCTCCTACCTTTTCAGTAGACAGAGACCTGCGAAGAAAGCTAAGCAATCCCTCTTCCTTTGCAAAGAGCAAAGATGTCTGTAAAACTGAAAGTGACATGCATTAGAACAATTTTCAAAACACTTGTGCTTGTGCCTTATAGACACTATTAGACTCAACACTAAGCATGGGACAATAACCGTTTTCAAGGTATACCACGGTTTGGAAAAATCCAGGATTTAAAACCACCAAAAATGTCTTCTATACCATTCCTAAGGAATATGTAAGATTTCTTTTTTTAACGTTTTAGCTTCCTTTTTTATTTTTTTAGGACAACAGGCTCTTCAGCAGAAAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
prkdcyu27/yu27 (AB)Homozygous♀+/- ♂+/-7 figures with image from Jung et al., 20163 figures with image from Jung et al., 2016
prkdcyu27/yu27 (AB)Homozygous♀-/- ♂-/-
prkdcyu27/+ (AB)HeterozygousUnknown2 figures with image from Jung et al., 2016
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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