Genomic Feature

mde948

ID
ZDB-ALT-170607-14
Name
mde948
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Schmid Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 6
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 45939400 - 45939406 (GRCz11) (1) Details
Nucleotide change
ACCCATG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 6 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TCCCATTCAGTGTACAAAACATTCTTTTTTTCTTTGTTTCGTCCCCAGACTCCCTCTTTTCACCCATCCCCACTCCCAAACACACGTGATGAGATAAGTCTCTCGAAATAAAATACTTACCAAAACACGCTAGGAATACCGACACTTCAAACACAAAGCACTTACATACCCCACCCCGATGACTTGGACTCCATACTAGAGCCAAAACTGGAGTTAAAGCCAGCACTGGCAGCGCCCGAGTTAGAGCCGGTGCCCCAGCCGAGAGCAGCTGAGCTGCTGCCGTAATTGCTGTTAGCCGAGCTATATGTTTGGGCTTGGTCTCGAGAGGAACTGGTGCCACTTGTGCTTGTGCCTGAAGTACCCGACTGATTCTGCTGAGCTAGCATTCCCATCATACCCCAACTACTCTGCAAGGCAGCCTGGGCGGCAGCCATCATGGCCGGGTTTAGATTGAAATTGCCAAAATTTCCCAAGCTGCTGGAGCTACCCCCACCACCACC
ACCCATG/- TTGCTTCGGCTGCCTGCAAAACCCTGACCTCCGAACCCATTCCCAAAGCGCCCTGCCCGCTCCATCATCTGCCTAGTGTTATTGTGTTTGGGCTCAGCGTTTGAGATATGCACACTGACGCCCTTGATGATCAGATCTTCTCCACACAAAGCGGCGGCAACCTGGAAAGAAGTTGGAAATTTCTTCAATATGGTCTGGAATGTTGTCATGAACAGGTCATTTTTGAAAAGTACATTCATTAGGAATGCCTCAGCTCTTTATCTGTGATTTTATCATGTAAAACATGACTTGCCTGGTCATCTGCAAAGGTGACAAAAGCAAACGCTCTGAACGGTTTGGGAATAAAGACGTCTGTGACCTCTCCGTACTGCATGAAGAACTGACGGAGCTCATCGGCAGTCATGTCCTCTGTGCAGCGGCCCACAAACACTTTACGGCTCCTCATTGGTTCATCTATACCTTGCTGTTAAAGTTTTAAAAACAAAATGGTTTAGCGTAAC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
tardbpbmde948/mde948 (AB)Homozygous♀-/-text only from Schmid et al., 2013
tardbpamde114/mde114; tardbpbmde948/mde948 (AB)Complextext only from Schmid et al., 2013
tardbpamde114/mde114; tardbpbmde948/mde948; s896Tg (AB)Complextext only from Schmid et al., 2013
tardbpamde159/mde159; tardbpbmde948/mde948 (AB)Complextext only from Schmid et al., 2013
tardbpamde159/mde159; tardbpbmde948/mde948; s896Tg (AB)Complextext only from Schmid et al., 2013
tardbpamde222/mde222; tardbpbmde948/mde948 (AB)Complextext only from Schmid et al., 2013
tardbpamde222/mde222; tardbpbmde948/mde948; s896Tg (AB)Complextext only from Schmid et al., 2013
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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