Genomic Feature

umo6

ID
ZDB-ALT-170404-9
Name
umo6
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Wei Ge Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 18
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 39631858 - 39631862 (GRCz11) (1) Details
Nucleotide change
GATCC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TGATAGCTTTAGATTTATTAATGACAATAATGCATTTCATAATATATAATACATTCTTACTTAATTCAGTTTGCACTTAAAGGGATAGTTCACCCAAAAACTATTCAACACAAAATGTTAGAATGTTAGAAACCTGTAATCATTGACCTCTATAGAAGGAAAAATAAATCAAAGTCAACTGTTTCCAACATTCTTCAAAATATCTTCTTTTGTGTTGAACAGATAAAGAAACGGGTTTGTGACTAATGAAGACTAATGATGGTAGATGAACTGTCCCTTTATTAAGTATGTTGTTTCAATGTAATTTGTGCTGTTTTTCAAAGTATCTGAAAGTGTCTTTATTTTTCATAAGAGTGTTGTGTGTGTGTGTGTGCGTGCGTGCGTGGATGCGTATTTGTGTGTTTCTGGACTCACCTGCTCAAGATGAGAGTTTCCTCACCATTGATCCAGACACGCACAATGTCTCCATACTTGCTGTTGTAGTAGTTGCTGGCAGTCCC
GATCC/- CAGACCAGATGAACCGACAGTAGGAGACAACAGGACCCAGACCAAAAAAGAAAGAAGGACCTAAATGAAACACATTTTAGCAAGTCAGTGACATGACATCATTGATCAAAGTCTATTTTAAAGCAGAACTATGTAAGTTGTTTACCTTAAAATAAAGTTCCTATAAAATTATATCAAGTGGTAAAACGACTTTTAAGTTTGAATTCTGACGCTGGGGCTTCCAGAAAGTTGCAATGTGTTGCCTTAAAGGAACACTCTACTTTTTACAATCCCCCATTAGCATCATTACCATTAGCATCTTGCTCAAAAATATTCAAAAGCTTGACTAAATACAACATGTAATAAGACCGACAGAAAATTTAAAGTAGCTTTTTTCTGGGTCAGAAATATGATATGGCTCAGAAAATATTCTCATTCTGGTGTAATAATTCAGGAAATTTGATTTCGCACCATGGCTGCTGCAGGCACAATGTTATTACACAATGCCTATAAAAAGTCTC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cyp19a1aumo6/umo6 (AB)Homozygous♀+/- ♂+/-Fig. 2 with image from Lau et al., 2016
cyp19a1aumo6/umo6; zf45TgComplexFig. 7 from Qin et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations