Genomic Feature

uc43

ID
ZDB-ALT-170117-6
Name
uc43
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Draper Laboratory
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 18
Variants
Variant Type
Delins
Variant Location
Chr 18: 39636087 - 39636093 (GRCz11) (1) Details
Nucleotide change
TCTGATG/CT
Variant Notes
stop in Cytochrome P450 domain
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp inserted / 7 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TATTAATAGGTTGTAGTTGGGTTTAGGTATTAGATAGAATTAGATATATCAAATAAAATCATACTATATAAGTGCTAATAAACAGTTATTATTTTATTAATAGGCAACCAGTAGAAAATGGTGTGATTTGTTACTTAATCTAACTTAGCACATTTTTTACAGGTTACCACAGTTAAATAGACTTAAAATGGGTGCATAAATGATTGTAACCCCAGAAAATAATTTAAATCCTTTTATTGACATATGATTAGGTTCATTTCTTAAAACTTAATTAAAATACGTACAGGTTACAAATAGCAACATGTAAATAAGTTACCTGTAACAATGAAAGTAGGTTTACCGGCTTGAGTAATTTACAAATATAAATTATCTCTACAGTAGGTATTACTTTTTACATTGTGTGTATTTAAAAAAAACAACAATCTGCAAAATAAGAACGTAAAAAACGTCTGAAACAAATCCAACTGACCTGGAATGTGTGATTTGTGTGGTCGATGGTG
TCTGATG/CT GCCAGCAGCAGGCAGAGTAGCAGCAGCAGTATTGTAGCTGTAGCTCCACACGCATTGTCCTGAGCCCTTTCAGTGCCGTTATGAGCCCTTTGGATAAGAAGATCCACCACAGCCTCGCCGAGACGCACCGGCTTCATTCCACAGGGCTGGAGCAGATCACCTGCCATAAGAACGGATTAAGAAGCAAGTCTAAAGCCTCTGAACTGCAGACGTACACTTTTATATCCCAGCAGCTGCATGGGACTCAATCAGGATAATTCAAAAGTCAAAATAAAAACGCTGCGTAACCTTGTGTGCTCCTTTGTGTCCTTCAGCGTCGAGTTTCCAAAACATTTACCATGACACTCAAACCCTCAGCTGTGTGCAAGTCATCTCTGGGTTTTCATCAGGACTTCAAAGACTTGAAAGGATATTAGACATCTGCGGCACGTCCTCGAGTTATTCTACAGCAGTCAAATGAGAAAACATCAGGCCTACAAACAAACAAAAAGTGTCCTTAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cyp19a1auc43/uc43HomozygousUnknown
cyp19a1auc43/+; uc02TgComplexFig. 4 with image from Dranow et al., 2016
cyp19a1auc43/uc43; uc02TgComplexFig. 4 with image from Dranow et al., 2016Fig. 4 with image from Dranow et al., 2016
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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