Genomic Feature

ic3024

ID

ZDB-ALT-160817-3

Name

ic3024

Synonyms

None

Affected Genomic Region

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

Lab of Origin

Del Bene Lab

Current Source

Other Pages

Notes

No data available

Genome Browser

Genome Build: GRCz11Chromosome: 9

Variants

Variant Type: Small Deletion
Variant Location: Chr 9: 288599 - 288611 (GRCz11) (1) Details
Nucleotide change: GGTTTTCATCCAT/-
Variant Notes: homozygotes fail to inflate their swim bladders and die 10 days ...
Auer et al., 2015

frameshift at amino acid 122 and a premature stop codon after 162 of 1033 aa's ...
Auer et al., 2015

Effect on DNA/cDNA, transcript, protein (from publications)

Sequences

Flanking Sequence: GATTTTCTCCATGTAGATCTCGAAGTAGGAGACCTGAGGGAAACCACACACAGCTAACATCAGACCAGCTTTAATTTATCACCAATGTAAGAAAGCTCTATTACTGAACTAAATGATAAAGCATTAACCTGATTTGACTCTTAAAGGGATTTTACAACCAAAAATCTAAATCTTCTCACACTTAACTGCTAATAAACTTTAACAGCACAGTTTTATTCTTCTGTTGAACACAAGACAAGATATCCTGAAGGATGCTGGACAAAATGATTTTCATAGCAGGAACAAAAACACAGTTGTTTCCCAGTGTATATTCCTTTGTGTTCAACAGAAGAAAAACACTTGGTTCAGAACAAGTGGAGGATGGAGAAATGATGACAGAAGGTGTATTTTTGGTTGAACTGTCCCTTTGAAACTGCAGTTTCAGGCTGGTGCAGCTTATTGTCCTGGGTTTCGGGGATGATGGGACGACTGATCTCTGTGTACCTTGATGTGGAACTCCA
GGTTTTCATCCAT/- GGAGAAGATGTGGTTGAAGATGTCCTCGGCGATGCGGGGAATGATGCCCATCTGCTGCGGGTCGTGAAGGTTTCCCTGATAGCACATCACAGTCAGTGAGATTTCTGAAACTCTGACATTTCTTTAAGTGCAGTTTTATATTAGTGTAATCCAAAGAAATTGAGTTTATTCTAGAGTAGGGTTAAACACGGACCAAAACTGCAAATTAAGAAGTGAAACACAGACATCACAATCTGTGAACAGAAGTAAAACCGCAGTAGTAGATGCACATTAAAAGCCAAATTAAAGTTTTAAGATAGAAGTTGAAGATTAAAGTGTGGAAGCCGTTCTAACATGTTTAATACAGACTGGAGAAAGCCAATCATTCACTATCGTCAAACCAGAGACATTTAACTGACACACTCATCTATTTAGGGGTGACGCAGTGGCACAATAGGGAGTGCTGTCGCCTCACAGCAAGAAGGTCTCTGGTTTGAGTCTCGGCTGGGTCAGTTGGTGTT
Additional Sequence: None

Fish

Show only fish without sequence targeting reagents

Fish	Genomic Feature Zygosity	Parental Zygosity	Affected Genomic Regions	Phenotype	Gene Expression
kif5aa^{ic3024/ic3024}	Homozygous	♀+/- ♂+/-	kif5aa	3 figures from Auer et al., 2015	3 figures from Auer et al., 2015
kif5aa^{ic3024/ic3024}; a4598Tg	Complex		kif5aa	Fig. 4 from Auer et al., 2015	Fig. 4 from Auer et al., 2015
kif5aa^{ic3024/ic3024}; ic3021Tg; ic3025Tg	Complex		kif5aa
kif5aa^{ic3024/ic3024}; ic3021Tg; ic3025Tg; tpl2Tg	Complex		kif5aa	Fig. 5 from Auer et al., 2015	Fig. 5 from Auer et al., 2015
kif5aa^{ic3024/ic3024}; ic3025Tg; tpl2Tg	Complex		kif5aa	Fig. 5 from Auer et al., 2015	Fig. 5 from Auer et al., 2015
kif5aa^{ic3024/ic3024}; ic3025Tg; zf350Tg	Complex		kif5aa	Fig. 4 from Auer et al., 2015	Fig. 4 from Auer et al., 2015
kif5aa^{ic3024/ic3024}; s318tTg	Complex		kif5aa	Fig. 3 from Auer et al., 2015	Fig. 3 from Auer et al., 2015
kif5aa^{ic3024/ic3024}; s356tTg	Complex		kif5aa	Fig. 2 from Auer et al., 2015	Fig. 2 from Auer et al., 2015

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Citations

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