Genomic Feature

muz120

ID
ZDB-ALT-160128-4
Name
muz120
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sherine Chan Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 25
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 8488680 - 8488690 (GRCz11) (1) Details
Nucleotide change
TGCTCCATAAA/-
Variant Notes
deletion leading to miscoded protein and premature stop

Rahn et al (2015):  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGATGCAAGTTGGAGCTAAAATCTGCAGGAAACCGTCCCTGAAGGACCGAGTTTGGACACCCCTGACTTACAGAATACACAAACTTCTTACTTTTTAACATGATTTTGAATTTTGCATCAAACAAATATCCTTATTTTAAAAAAAAATAAAAAAAAATAAATAAAACCAACACTGAAACTAAAAAAAAAACTAAACTAAAACAAAGCAATTTCAAAACATATAAACTAATAAACTAGTAAATCTGCATCTAAAACTAACTCAATTAAAAAAATTGAAAACAAAATTCAAAACGAAAAACAAAACAAAAATTTGAAACAAAATTTGAAAACAAAGTCTAAAACTATCATAACCTTACCCACAACTGTGCAAATGTTCTGTTTTTTGCCTACCTGCGCAGTCCTTTGGTGAGCGCGTACATCTGCCGAGCTTTCCCAGCAGCCTCCTGTTGGCTGAGTCTGTGGTTGAACTGCATGAGCAGTCGCTCTGCAAATGGCTGACC
TGCTCCATAAA/- TGCGCCCATAGTTGAAGACCTTGGCATGTTCACGACTGATGCCCACAGCATCGGCAGTGCGGCTGTGCAGATCTGTGCCCTGACTCTTCTTTCCCTGCAGCGTCATCCAGCCGAACGCCGTGCAGCCTGCAAAACACACAGAATCAATGTACTGCTTTAAACTGACTAAAGGTCCTGTGAAATCAAAATGAAACATTTTAGATGTTGCCTTCAGTCTGTTCGTTTTAAGGATATCTATAAGCTAGTAGAGCACTCCAAAAAAATTGCATTTATAAAATATAAAACTGATATACACATTCAAAAGCTTGCAGTTTGTCGCTTCTGCATAAATTGATCAGGGATTTATTTTCACGTCACATTTCAGTTTCACATCAAATCTTCTGACCAATCAAATGCTCTCTAGTGTCTGACATGCCCCGCCCCCTTCATGGCACTTCTTTTTTGCTGCACTTGAGCTCAACCACTCTCACTGGCAGCGCTATGATATAAACGAAGCACTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
polgmuz120/muz120 (AB)Homozygous♀+/- ♂+/-5 figures from Rahn et al., 2015
polgmuz120/+ (AB)HeterozygousUnknownFig. 7 from Rahn et al., 2015
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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