Genomic Feature
ko822
- ID
- ZDB-ALT-151007-29
- Name
- ko822
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Kawahara Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 16: 32138774 - 32138775 (GRCz11) (1) Details
- Nucleotide change
- CG/CAT
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 3 bp inserted / 2 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
GGATGTGATTTTTGTTGTTGTGCAGAGCGTCAGAATCACGCACGTGAGCTAATCAGAGAGATCTCACTACCAGAATGGGATGGAATCGTCATTGTGTCTGGAGATGGACTTTTGCATGAGGTGGATATTTTCATCACACCTTGCATAATTATTTATTATAATGCTTCGATGAAATCAGTCAAATTTTTGCCAGTATTTGTTTTGTGTGAATTTTTATTGTAATCATTTTCAAAATGTCAAATGGCTAAGATAAACTTAGTAGAACAAATTTTTTAAAAATATATAGTATATGCTGGACAGGGGATGTGTACATAAAAGATGATAAAAGATTTCTGTAGCTAGGTGATCAGCCATAAGGCTTGTATGTGTATGTATGTGTATATATATATATAATTTACATAATAATTAATGTGTTCTTTTTCTTTAGGTGATAAATGGCCTTATGGAAAGGCCAGATTGGGAACAAGCAATAAAAACTCCTGTGGGAATTCTGCCTTGTG
CG/CAT TCTGGAAATGCACTTGCTGGTTCCATCAACCACCATGCTGGGTATGAAATGTACTTGAGCTCACTTAGTACAAACTGTGAAAATGTGCAGTTATTTAGAGAGCCTCCATTATTTCTAAAAGAACAGTTTAAAATTTGAAGTGGTCATTATTTATTCACCCACAATCCAAAATATTTATATTGTTACTTTTTCTTTCTTACTCAATGTGGAGATTTTTGTTTTAATTTTTTCATGTTTTTTAAAATGCAAAACATACAGATTTGGAACAATATTCTTCATGCGTATTTGCATTCCTCTTTGGTGCAATTTATTTTTAATGCTTTGTTACATGAACAATTTCACATGCTGCAATGTGCATATAAAGGGCCTTCTGTTACTATTCCCTTTGAAGAATGACATATGTAGTATGTAGAAGGAAAAATGAATGTAGAAGGAAAAGTGTTTGTGTAGTTGATACAGAAATGGTGCCTTTGATTCTAACATGAGTGTGACATTTCTCT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| sphk2ko822/ko822 | Homozygous | ♀+/- ♂+/- | Fig. 3 from Hisano et al., 2015 | Fig. 3 from Hisano et al., 2015 | |
| sphk2ko822/ko822 | Homozygous | ♀-/- ♂+/- | Fig. 3 from Hisano et al., 2015 | Fig. 3 from Hisano et al., 2015 | |
| sphk2ko822/ko822 | Homozygous | ♀-/- ♂-/- | 4 figures from Hisano et al., 2015 | 2 figures from Hisano et al., 2015 | |
| sphk2ko822/+ | Heterozygous | ♀-/- ♂+/+ | 2 figures from Hisano et al., 2015 | Fig. 5 from Hisano et al., 2015 | |
| sphk2ko822/+ + MO1-sphk2 | Complex | Fig. 5 from Hisano et al., 2015 | Fig. 5 from Hisano et al., 2015 |
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Supplemental Information
- Genotyping protocol
- None