Genomic Feature

tnr39

ID
ZDB-ALT-131101-1
Name
tnr39
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Nüsslein-Volhard Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 21
Variants
Variant Type
Point Mutation
Variant Location
Chr 21: 19484131 (GRCz11) (1) Details
Nucleotide change
A/G
Variant Notes
Missense mutation (1545 A>G) causing a Q516R replacement.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
A>G at position 1545 (1)
Transcript Consequence
Missense (1)
Protein Consequence
Amino Acid Substitution: Gln>Arg at position 516 (1)
Sequences
Flanking Sequence
AGCTGTTTACCCAACACCATTTGCTAATTCAAGATACAGTATCTCAGATATTGATTAGTTTAGCTTCCATCTTAAATCCCAGTGACATTAAAACATTTACACATCACAAAAACGAATTACAAATCGAAATCCCTCACCCCAACTCGGGCTGATTTGTAATTGATGTTTTCATTAAAGCCTGCAGGAGTTCAACTTGGAATGTTACTTCATGCGTTTGACTTTTTTTTGCTGCAAAACTTCCAGATCTGTAGATCCACAGTTCTCAGCTCATTATAAAGTCACTCCACATCTTCAGAAACAACTTTTAGCCATGCTGCAGACGCTTTCTGATATCTCGAAAAAGCAAGTGCAAGATTTGATCAGATTGCAGGCTGTTCTTTAAGCAATGCCTCTCTTTCTGTCACAGGAGCAAAGGAAATTAGGCGGAGATGGAGTGGCTCCTGAGGGCCGCGGGACAGGGATGGACTGCGCCGCTCTTACCTGTATGGTTCAGTTGGCTC
A/G GGTTATTGTTGGAGCTGGACTGGGAGCTCTGGTCAATCTAGCGGGTAGCGTGATTGTAGTAGTGCTTTCTGCCTCAACAGTGTCCCTAATCGGCTGCCTCTTTATTGCTATCTTCATGTGATGTACAGAATAAGCCTCAAATAAATACCCTTTCTCTATTTCGCTTGGTTCGTCTCCTCTATTCAACAAGACATTTTGGGATGCAGCAGCATGAACGTTTGCTGATTCCATTAAGTTTTTTTCTGATGTACTGCTATTCACCTGCCACATTCATAAATAACAGTCTGTGAAGTTGAAAGAAAGATTACGTACACTCAAGGAAGAGTTGACAAGAAATGAAATGTTTGGATTGATGTTTTATGTCGTTTTGTTGCTTTTTTTTAAAGCGACTAGCACTGTCAAACCTTCATTTAAATATTTACTTTGAACAAAACAATGACTGGATTAAGAAATACAAACATTTCAGATTCTTCTCTTACTTTAATTTTAGTAATATCAAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
slc45a2tnr39/tnr39Homozygous♀+/- ♂+/-Fig. 6 from Dooley et al., 2013
slc45a2tnr39/+; slc45a2b4/+Complex2 figures from Dooley et al., 2013
slc45a2tnr39/tnr39 + MO1-atp6v1hComplexFig. 6 from Dooley et al., 2013
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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