Genomic Feature
sa12573
- ID
- ZDB-ALT-130411-2287
- Name
- sa12573
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation
- Protocol
- adult males treated with ENU
- Lab of Origin
- Stemple Lab
- Current Source
-
European Zebrafish Resource Center (EZRC)
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Zebrafish International Resource Center (ZIRC) ( order this ) - Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 2: 23948838 (GRCz11) (1) Details
- Nucleotide change
- C/A
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- G>T (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
TGTTTTGCTTTTTAAGTCCTCAATGTGTCTTCAGAAGCCATTTTGCTAAGCCTGTATGTGTTGTTTTTAAACTCTCAGTGAATTATAATTTTTGTGTGTGCTGTCCCTTTTAAATATATTGATCTGTTTTGTAAATTAAGCTTGCTCTATGCTGTTTTTTAGACCTTGAGCCAGCCCAGAAATAATCCAAAGCACCTTAGACAGTGAAGTAGGCAGGGCTAGTGTATGAGGGGAGGAGCCAAGCCAGAATGACATGCGCCATACCCAAAGCCAAACCCCTCAATTATTAACTTACTGGCGTTTTGCAGTGTGGTCTAGGAGGAACTGGGAAAACTGTCTTTAAGATTCAGAGCACAATCATTTCATGACTTTCATGAGAAAACTGCACATGTTAGGATAACCCACAATTTGATGCTCATTTTCAGCGCACATCAAATGTGCTAAAAGGTTAAAACTTACTCCATTGAGGCCAATCACTCGTCCTGGTGGCCCTGGAGGTC
C/A AGGTGGACCTGGTGGACCCTTTAAAATAGATGAGTCATTATAAATAATTAGTTTGTAAGATATGAAACAAAATGAACACTCACAAACACACACACACACACACACATACACACACACACACACAAAAACTTACAGAGGGACCACTTGCATCTCCCTTGTCCCCTTTCCTTCCAGCTATTCCAGGTCGACCCTTTAAGGAAATAAGCATTTATGAGATTAAAAACTACAAATTAACACGGGTACTCCATAGGTGTAATGTATACAGTAAAAAACACTTACTATATTATTCTACTTCACCCCTAACCCTAAACCCAACCCTCACAGGAAACCTGTGGCAATATTTGAATAGGAAAAGACCCCATTAGGTTTGATTTTTAGTGTTTTGAATTACAAGGATATCAGGTATGTCCTTGTAAACCACTAGAATACAACTTAAAAAAATAACCTTGTAAATTACCAAAACCAGTACACATACACAACACAAATACACATAAAAAGAA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| col15a1bsa12573/sa12573 | Homozygous | ♀+/- ♂+/- | Fig. 8 from Guillon et al., 2016 | Fig. 8 from Guillon et al., 2016 | |
| col15a1bsa12573/+ | Heterozygous | ♀+/- ♂+/- | Fig. 8 from Guillon et al., 2016 | Fig. 8 from Guillon et al., 2016 |
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Supplemental Information
- Genotyping protocol
- None
- Nemoz-Billet, L., Balland, M., Gilquin, L., Gillet, B., Stévant, I., Guillon, E., Hughes, S., Carpentier, G., Vaganay, E., Sohm, F., Misiak, V., Gonzalez-Melo, M.J., Koch, M., Ghavi-Helm, Y., Bretaud, S., Ruggiero, F. (2024) Dual topologies of myotomal collagen XV and Tenascin C act in concert to guide and shape developing motor axons. Proceedings of the National Academy of Sciences of the United States of America. 121:e2314588121e2314588121
- Guillon, E., Bretaud, S., Ruggiero, F. (2016) Slow Muscle Precursors Lay Down a Collagen XV Matrix Fingerprint to Guide Motor Axon Navigation. The Journal of neuroscience : the official journal of the Society for Neuroscience. 36:2663-76
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