Genomic Feature

sa11633

ID
ZDB-ALT-130411-1447
Name
sa11633
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation
Protocol
adult males treated with ENU
Lab of Origin
Stemple Lab
Current Source
European Zebrafish Resource Center (EZRC)    ( order this )
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 2
Variants
Variant Type
Point Mutation
Variant Location
Chr 2: 10776536 (GRCz11) (1) Details
Nucleotide change
C/A
Variant Notes
The mutant protein has a shortened Linker Domain, and lacks the Zn-finger  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
C>A in Exon 4 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation: Ser>Stop at position 145 (1)
Sequences
Flanking Sequence
AGGATGCCCTTCACAGCCAATATAAAATTGTAAAACAAAAAAATATATACTTTTACTGTAATAAAACAGTAATAAAAGCAAAAATGTTTTAGGGTTCCATTATGCAATTAAGTTAACGTAAATAATTTGAATGGATTGAACTTAAAACAATTAAGTTGTCCCAAAAAATGTCAATTGCTGAGTTGTTTCAGCTCATTTTAAATAAGTAGTTTAAACAAGCAGCAAACATATGTTTGGAGTGTACTGTAAGTCTATTTTACAGTAATTATGTCAATACATGCGACAATTTTTGTACTACAAAGTTTTTTTTACAGTGTAATGCAAAATAGCTCATTATACTTTTTCATATCTGACTGTAGATCTGGATAAATGCCCGGTTCCTTCTCCAGACGACTCTCAGCCTTTCGACATGTCCTTCCGTCCATACGTTTGGTCTCATTCATCATCTGAGCTCAGGCATCTCATTCAGTCCTGCAATCGTGTTTCTGTGGATTCAGACT
C/A GTCAGTGGGGGTTTACGATGCTATGGACAGAAGGCCGAGCGCTCATCTCCTCATCCAACCAACACAATCTAGGCGATTTTACCAGGACTATGGCTCCCTGACCCCTAACCTGCTGGATAATCGAGGCTTTTACACTGACTTCAAGATGTCGACTAAAGTAGCAGAGACTGATTCAGAGTCAGATATGACGTGCACACGACTTCAACTAAGCGGGTCCTACAAATGCATAAAATGCACTAAGGTATAAAAAATTTAGATTCAGAATATTTTGCTTCTTATAGATACTCAAGCATTATTATCAGTCGCTGCATTGAAAAAAAAAAATCTTAAAGTCGCAAAATTAAATGGCTTTTTTCGATTCTTTGTAAAAATTTCATATTTAATCCCGCTGCTTATGGAAGCAGAATTGTAGCTTCGACTTTAACCTCACAATTTAGACTTTTAATTGTCAGAATATGTAGTTTGCATGTTTTATATACAGTTAGGGCCATAAATAATTG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
gfi1aasa11633/sa11633Homozygous♀+/- ♂+/-3 figures from Moore et al., 2018
gfi1aasa11633/+HeterozygousUnknown2 figures from Moore et al., 2018
gfi1aasa11633/sa11633; gfi1bsh339/sh339ComplexFig. 6 from Moore et al., 2018
gfi1aasa11633/sa11633; gfi1bsh339/+ComplexFig. 6 from Moore et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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