Genomic Feature
vu270
- ID
- ZDB-ALT-121112-5
- Name
- vu270
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- adult males treated with ENU
- Lab of Origin
- Lila Solnica-Krezel Lab - Vanderbilt University
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 18: 38295634 (GRCz11) (1) Details
- Nucleotide change
- T/A
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- T>A (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Cys>Stop at position 94 (1)
- Flanking Sequence
-
GGTGTCCACTGGTAATAGAACATATTATTTTTGTCACATATTTGTTTCTTTTATAGTAGGATTTCAGATGAAGCCTAGGTTCTTTGTTGCTGTAGTGGTGCAAAAGCATTTAAAGGTTTAGTTTACCTGAATAGAAAAATGTACTAAAATATTTGTGAGTTTTATCTGTTGAAATAAGACATTTTGGAAAAAAGTTGGAGGCTGTTAAACCATTGACAACCGTAGAAAAAAAATGGAAGTCAATGGCTCCCATTTTAAAACATAAAAAAGCACCTTCATTGAAGCTCATTTGTGTTCACTAAAGTAAAAAAAAAACTCAAAAAGGTTTGGAACTATTCTATCGAGAGTAAATAACAGAATTGCAATTTTAATCAAATATCATAGACTGTAAAATGGGTGAATATTCCTTTCATAAGTTTAGCTCATAGCTCCCTCTGTTGGTCAAAATAATCACTATATTGTTTCCTTCCTTTCAGACTGTTTGGTCAGGACGGACTCTG
T/A GCTTCCTGTGAAAAGAGGATCCGGGCCTTTGAAATGACCATGCGTGTGCGTGACAAAGTCTATCACCTCGAATGCTTCAAATGTGCTGCCTGTCAGAAACACTTCTGTGTTGGAGATCGTTACCTGCTCATCAACTCGGACATTGTGTGTGAGCAGGACATTTTTGAGTGGACCAAACTCAACGGCAGCATAGTATAGTTTTCTGCCGAAATCATAAACAAAATGTAACCTGTCAGCATTTTCAACAAACCCTTTACTAATAGAACATCAATAACAAAATATATATTTTAAAGAAATGATCTTTCTGGCTCTATTAGCTGTGCTCTAAATGCTTGTCTCTTTTTGTTATTTAAACTTGAGAAAAATGCCACCAGGTTTCCCAGTGTTGGGTTGCAGCTGGAAGGGCATCCACTGCGTAAAACATATGCTGGATAAGTTGGCGGTTCATCCCGCTGTGGCGACCCCTGATTTTTAAAGGGACTAAGCCGAAAAGAAAATGA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| lmo2vu270/vu270 (AB) | Homozygous | ♀+/- ♂+/- | 3 figures  from Weiss et al., 2012 | Fig. 1 from Weiss et al., 2012 | |
| lmo2vu270/vu270; s843Tg | Complex | 2 figures from Weiss et al., 2012 | 2 figures from Weiss et al., 2012 | ||
| lmo2vu270/vu270; s896Tg | Complex | Fig. 2 from Weiss et al., 2012 | Fig. 2 from Weiss et al., 2012 | ||
| lmo2vu270/vu270; s896Tg; vu157Tg; vu271Tg | Complex | Fig. 5 from Weiss et al., 2012 | Fig. 5 from Weiss et al., 2012 | ||
| lmo2vu270/vu270; s843Tg + MO1-tnnt2a | Complex | Fig. 6 from Weiss et al., 2012 | Fig. 6 from Weiss et al., 2012 |
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Supplemental Information
- Genotyping protocol
- None