Genomic Feature

hu3334

ID
ZDB-ALT-100728-1
Name
hu3334
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
den Hertog Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 21
Variants
Variant Type
Point Mutation
Variant Location
Chr 21: 15793079 (GRCz11) (1) Details
Nucleotide change
T/A
Variant Notes
The allele has a TTG to TAG codon change resulting in a L133X premature stop.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
T>A (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Leu>Stop at position 133 (1)
Sequences
Flanking Sequence
ATTTGTTGATGCTTTTTGTCTTGTGCGTTTTAGCGTTAGTTGTCTTAAGTTTTAAGCAAACAAGCAATTGATAGTAAAGAATAAACCATTCTTGATATTGCTATTTGTGAAAAAAAGGTTCAGATTCCCATTAATGAAGGCTGTTTACTTCATGAATTTATTGTATTAAATGTATATATTCTAAAGCTTAAAAATCTCAATCTTAGGTGCGGTCCAGACCACCAAACCTACACCCCATCCTCCCACGACACCCCTAATCATAGTCACCAATGGATCCCCAACAGCCGCTCCAACATCCACACCGTCCCCACAACTTATTGCAACAAAAGCCTTCAATGACTCTGAGGGTACTGCGGCCCCAGAGGCTACCACTGCTCCTCCAGTCGTCCCTCCTCCAGCTGTGCCCATCCCTACTGTGGTGCTACCTGTACCGCCAACCCCAACTGCCGCATCCCCGTCTCTCACCACCAACAAAACTGGAGATCACCAGACCACCGTTT
T/A GGCTCCAGCAGGGACGCCAACGCCTGATCCCACATCCACCCAGTCCTCCTCAGAGCCCGAGACGGAGACCCCGTATACCCCAGCTGATGCCACCACTGCTGACGTCAACAAGCCAGAAGGTACCATTCATCTGTTCTTTTCTTTTTACCATTTAAATGATTGATCGTCATTTAAATAACAATCAATTAATCAGTTAAGCTTAATAATGTCTGTAATTCAGTGGCACATTGAAACTGTCACAAAGTGACACTCAAAACACAAGCATAATCACTCACAGGAAAATACTTTAGTGTAATTAAAAGGCTAGTAAAATTAAAAAGTGTAATTCAGTACAGTGTTTCTCAACCACGTTTCTAGAGGATCACCAGCACTACATGTTTTTCATGTCTACTTTGTCTGCTGATGATCTGAATCAGGTGTGTTTGGTTAAGAAGGCATGCAAAATGTGCAAAGCTGGCGGTCCTCCAAGAACATGGTTGAGAGAATTTTTAATGATTAAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ptprahu3334/hu3334Homozygous♀+/- ♂+/-3 figures with image from van Eekelen et al., 2010Fig. 8 with image from van Eekelen et al., 2010
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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