ZFIN ID: ZDB-GENE-020107-1

Mapping Details

Gene Name: protein tyrosine phosphatase receptor type A
Symbol: ptpra
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 21 17,165,277 - 17,225,951 GRCz12tu
NCBI Map Viewer 21 17,165,277 - 17,225,951 GRCz12tu
Ensembl 21 15,756,549 - 15,816,317 GRCz11
NCBI Map Viewer 21 15,756,531 - 15,817,237 GRCz11
UCSC 21 - GRCz11
Vega 21 15,660,572 - 15,720,340 GRCv10
Mapped Clones containing ptpra
DKEYP-87D8 Chr: 21 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source Citations
hu3334 21 15,793,079 GRCz11 DIRECT van Eekelen et al., 2010
sa10736 21 17,201,943 GRCz12tu DIRECT Sealy et al., 2025
21 15,793,199 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 15,697,222 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 13,996,267 Zv9 DIRECT Busch-Nentwich et al., 2013
sa14038 21 17,201,810 GRCz12tu DIRECT Sealy et al., 2025
21 15,793,066 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 15,697,089 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 13,996,134 Zv9 DIRECT Busch-Nentwich et al., 2013
sa16696 21 17,217,649 GRCz12tu DIRECT Sealy et al., 2025
21 15,808,905 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 15,712,928 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 14,011,973 Zv9 DIRECT Busch-Nentwich et al., 2013
sa23893 21 17,199,291 GRCz12tu DIRECT Sealy et al., 2025
21 15,790,547 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 15,694,570 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 13,993,615 Zv9 DIRECT Busch-Nentwich et al., 2013
la013979Tg 21 13,960,420 - 13,960,430 Zv9 ZFIN_Zv9
la013980Tg 21 14,017,551 - 14,017,561 Zv9 ZFIN_Zv9
hu3334 21 GRCz11 OTHER_MAPPING ZFIN Curated Data
la013979Tg 21 GRCz11 OTHER_MAPPING ZFIN Curated Data
la013980Tg 21 GRCz11 OTHER_MAPPING ZFIN Curated Data

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
gnrh2 GENE 21 Kuo et al., 2005 Kuo, et al. (2005. J. Biomed. Sci.) reports mapping gnrh2 to LG21 5.3 Mb from  ...

OTHER MAPPING INFORMATION
Chr 21 Kuo et al., 2005 Kuo, et al. (2005. J. Biomed. Sci.) reports mapping gnrh2 to LG21 5.3 Mb from ptpra.
Genomic Feature hu3334 is an allele of ptpra
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.