Genomic Feature
hg1
- ID
- ZDB-ALT-091019-1
- Name
- hg1
- Synonyms
-
- w84x (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- adult males treated with ENU
- Lab of Origin
- P. Paul Liu Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 1: 1395348 (GRCz11) (1) Details
- Nucleotide change
- C/T
- Variant Notes
-
truncation of the mutant protein is in the Runt domain
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- G>A in Exon 4 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation: Trp>Stop at position 84 (1)
- Flanking Sequence
-
TTCAACTTTAAAAGAACCCAAAAAATAGCACAAACGAATCAACTACAGTCAGTGTTATGTAAAAAATAATTGATCATGTGCCACAGAACTATTCGTTCATTCATTTTCTGTCCCTTTATTCATCAGGGGGTCACCACAGTGGAATGAACCGCCAACTATTCCAACATAAGTTTAGCATTTGCCCTTCCAGCTGCAACCCAGTGCTGGGAAACACCCATACACACTCATTCATTCACACACACTCATACACTACGGCCAGTTTAGTTGATCAGTTCCCCTATAGCGCATGTGTTTGGACTGTGGGGGAAACCGGAGCACCCGGAGAAAACCCACAACAACACGAGGAGAACATGCAAACTCCAGACTGAAATGCCAACTGACCCAGCCGGGACTCTAACTAGCTTCTTGCTGTGACACTGAGCCACCAAGCTGCCCAAAAATAACCCATATAAAACAGGTTCTGGTACCTTGAAGGCGATGGGCAGGGTCTTGTTGCAGCG
C/T CAGTGTGTCGGCAGGACGGAGCAGAGGAAGTTCGGGCTGTCGGTGCGCACCAGTTCCCCCGGGTGGTCGGACAGTACTTCCACCATGCTGCGGTCTGCCATGCGCAGTTTGCCCACCAGAGCGGCGCCGGTGCTCTCCTGAGCCCCCAGAGGCAAACCCTCGCTCATCTTCCCCGAGCTCAGGGTGGTGGAGGGAGGCGTGAAGCGTCGCCCGGGCGCAGGTTCTGAAACACAGGCCAGTGTTAAAGTGAATTCAACAAGGTAAGGCAAGCTTACGAATAAAAGAGACAAGTAAAAAAAAATTAAGAAAATAAAAACAAATATTATTAAAAACAGATTAAAATGTGTTAAAACAGGAATAATAAGTGCTCACGTGGGTTTCCCCTGGCTTCCCGGTTTCTTCCCACTATCCAAAAACATGCAACTTAAGTTAATTGACTAATTTAAATCGCCACCATAGACATGCTCCTAGTGAGTAAATATCCCTTAAGAGCGATCACT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None