Genomic Feature

f6

ID
ZDB-ALT-090520-3
Name
f6
Synonyms
  • f6Df (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Randall Peterson Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 23: 44963361 - 44963362 (GRCz11) (1) Details
Nucleotide change
TC/-
Variant Notes
The 2 bp deletion would result in a frame shift followed by a premature stop  ...
The 2 bp deletion would result in a frame shift followed by a premature stop  ...
This mutation is a 2 bp deletion induced by treatment with a custom zinc finger  ...
This mutation is a 2 bp deletion induced by treatment with a custom zinc finger  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGTCCACCTGAGTGTGTTCTCGATGCGCTCCTCCTTTAGGTATTTCTTCAGCATCTCTCTGAGCTCCGCCATGTACAGAACTACTTCCTCAGGCTGCCGGTCGTCTCCCAGTGCGTCGCTCAGAGGAATGTTGTCCGGCTCGCTGCGGCACAGATGACACATCCCGCGGAACGCCACGTATCCCAGCAGGAACGCTGCCAACGAGAGCCAACACTGGGACCAACACACACTACACTGCACTTACAGGACTAGTAAGTCAAATTGACTGCTTACATACACAACACCCTGAAACTGCTAAGTGAGATAGTGTGTGTTCGAGTGTGTGTCTGTGTGTGAGAGAGAAAGATTGCGTGTGTGTGTGTGACCTGTGGTGAAGATCAGCAGGCCGGTCAGTGTGAGGTAAACTGCTGCTTTCCTGCGGTTGACGTGCTGCTGCAGCATCAGTGCGGTGATGTCACTGTTGAGCGTGACATCTGACCCCTCCAGCGGCACCAGCTTCA
TC/- TCAATAGGAGGGGCTCTCCGCCTGACTCCGCCCCCTTCCTCAACGCCCTCATTAGCCTGAGCTCCGCCCCCTGCTGCCTACACGCACAGAACATCACAGGCAGCTGTCAATCACTGCATCATGTAACTGTCTATCAAACTAGTTTAAAATGAATATTCAGAGTTTATAGATCGGACTAATTAGCATTTATAAATGTCTGCCAACCACATGATCAGCGCTCCAAATGTCATCACCACTCACTGACTGAGTAATTTTCAATTAAACTAGAGCTTTAACACAGCTCAAATGTGAATGTAAAGGTGTCAAGTTGGAAAGGCAGTCTTTGCTTTATGTTCCTGTCAGTCCAATACAGCCTAGAGTCATTTAGAGATGAATAAATGAATGCATTAATTGTTGAGTAAGTGAATGAGTGAGTGAAGAATGAATGGATTGTTGAGTGAGTGAATGAGCAAGTAAATTCGTGAGAGAATGGATGAGTGAATGGGTGAGTGACCAAGTGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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