Genomic Feature

sa20

ID
ZDB-ALT-071108-9
Name
sa20
Synonyms
  • sa0020 (1)
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Stemple Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 21
Variants
Variant Type
Point Mutation
Variant Location
Chr 21: 21472370 (GRCz11) (1) Details
Nucleotide change
C/T
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
G>A (1)
Transcript Consequence
Splice Site (1)
Protein Consequence
None
Sequences
Flanking Sequence
CGATTAATCTCAAAAATAGCACATTTACAAAATATAATTCATACATCCACAGCACCCTTTACATTTACAAAACACAATTCGTAAATTCAAAACATCATAAAAAAAACTAAAATTAAATTTGTTAGTTCAAAACACGATTCAAAAACAAACTCCATTCGTCACATATTTCTTTTTTATACTTAATATATTATATACTTTTTTATAAAGATGCTTTAATTATAAATATAAGAAAAAAAATCACGCATTTAATTTAGTTATGGTAGCACACTAGGATACTTTACTGTGTGCAAGTACAAGTTAGTCTCAGCCACTACTGGAGACTTTGCTTGGCCCAGGAAAAGCACTGATTTATGACCTGATAAACTGAATGGTGCTTACAATAGTGTGACTGGAGTTGGGATGTTCATTAACAGTATCAGGTATTTCACATGACTTCACTTGAATTTTTTCATGGCCTTTATCAATCCAGCATCCACACACACACACACAGTCTCTTGTTA
C/T CTAGTACGCTGACAGTGGTGGAGGCCTGTGTGTTACCCAGCGGAAAGGTGGCAACCTTGCAGGTGTACACGCCGATGTCAGCAAAACCCACATCTTCCAGCATGATGGTGGCGTCGAGTGCAGAGGGCGAGCGGAAGGACAGGCGTCGCTCATAATCGGGAGGGATGGAGATACCAAACATGGGGTTGTACACGGCCAGGGTCACCCATCCATTGGGCAGCTTCCTCTCCCAGGAGCTCTGTGTCAGGCTGAGGTTTGTGTCCACTTGTACCCTGCAGCTGAGGGTGACATTCTTACCCAAAACAGCATTCACTTTAGGGGGGACGATCACCTGACTGCCATATACCAACCCTAGGGCACAGAAAGGGAGAAAAGGTTAGTCGCGTCAACATTTGAGCAGCAGCGGAAAACAAAGCACTTGAACAACATCTCTACTGACAAATCGGTTTTTATCCTGTTGGAGCACCGATCAATCAGACGCCAAGGTCTGTTAGCAGAGC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nectin3bsa20/sa20 (TL)Homozygous♀+/- ♂+/-text only from Busch-Nentwich et al., 2012
nectin3bsa20/+ (AB)HeterozygousUnknown
nectin3bsa20UnknownUnknown
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Supplemental Information
Genotyping protocol
None
Citations
No data available
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