Genomic Feature

hi2329bTg

ID
ZDB-ALT-040129-6
Name
hi2329bTg
Synonyms
  • hi2329b (1)
Affected Genomic Region
Construct
Type
Allele caused by Transgenic insertion
Protocol
embryos treated with DNA
Lab of Origin
Hopkins Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
Comment Citation
The construct was inserted on the plus strand of the genome. The gene in which  ... ZFIN Curated Data
The viral insert is within an intron of smoothened, not an exon (like  ... ZFIN Staff
Genome Browser
Genome Build: GRCz11Chromosome: 4
Variants
Variant Type
Transgenic Insertion
Variant Location
Chr 4: 14972235 - 14972236 (GRCz11) (1) Details
Nucleotide change
Variant Notes
The construct was inserted on the plus strand of the genome. The gene in which  ...
The viral insert is within an intron of smoothened, not an exon (like  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
Insertion in Intron 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
None
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
smohi2329bTg/hi2329bTgHomozygous♀+/- ♂+/-text only from Kishi et al., 2008
smohi2329bTg/+ (AB)HeterozygousUnknown
smohi2329bTgUnknownUnknownFig. for (hi2329b) from Phenotype Annotation (1994-2006)
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Supplemental Information
Genotyping protocol
hi2329btg.pdf
Citations
TSV
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