5'-TCGAGCTGCCTTCAGTCGT-3'

Term ID

CHEBI:76480

Synonyms

• 5'-d[TCGAGCTGCCTTCAGTCGT]-3'
• 5'-TpCpGpApGpCpTpGpCpCpTpTpCpApGpTpCpGpT-3'
• d(T-C-G-A-G-C-T-G-C-C-T-T-C-A-G-T-C-G-T)
• d(TCGAGCTGCCTTCAGTCGT)

Definition

A single-stranded DNA oligonucleotide consisting of five deoxyguanosine, six deoxycytidine, two deoxyadenosine and six thymidine residues connected by 3'→5' phosphodiester linkages in the sequence T-C-G-A-G-C-T-G-C-C-T-T-C-A-G-T-C-G-T. When part of a longer DNA sequence it can exist in a hairpin structure, with hydrogen bonding linking the six complementary base pairs C²-G¹⁸, G³-C¹⁷, A⁴-T¹⁵, C⁶-G¹⁵, T⁶-A¹⁴ and G⁸-C¹³.

References

• pubmed:17252585

Ontology

ChEBI  ( EBI )