Gene

allc

ID

ZDB-GENE-040718-471

Name

allantoicase

Symbol

allc Nomenclature History

Previous Names

si:ch211-284k10.3
zgc:91799

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to have allantoicase activity. Predicted to be involved in allantoin catabolic process. Orthologous to human ALLC (allantoicase).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:91799 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With allc Human Ortholog

No data available

Associated With allc Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR015908	Allantoicase domain
Family	IPR005164	Allantoicase
Homologous_superfamily	IPR008979	Galactose-binding-like domain superfamily

Domain Details Per Protein

Protein	Length	Allantoicase	Allantoicase domain	Galactose-binding-like domain superfamily
UniProtKB:B2GQF5 InterPro	395
UniProtKB:Q6DGA6 InterPro	395

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	allc-201 (1) Ensembl	Ensembl	1,748 nt	Select Tool
mRNA	allc-202 (1) Ensembl	Ensembl	722 nt	Select Tool
ncRNA	allc-003 (1) Ensembl	Ensembl	920 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations