ZFIN Sequences for Gene: col2a1a

ZFIN ID: ZDB-GENE-980526-192

ZFIN ID: ZDB-GENE-980526-192

SEQUENCE INFORMATION

Gene Name:	collagen, type II, alpha 1a
Gene Symbol:	col2a1a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_131292 (1)	4862 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005166863 (1)	5761 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC168504 (1)	5951 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01004423 (1)	5891 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC167477 (1)	5796 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:DQ335127 (1)	4862 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC163934 (1)	4758 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:U23822 (1)	1764 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC093433 (1)	919 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI437144 (1)	510 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI601358 (1)	418 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI629239 (1)	402 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI444422 (1)	304 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX927144 (1)	168503 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX530098 (1)	156637 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:Q2LDA1 (1)	1491 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:B3DLK0 (1)	1421 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_571367 (1)	1491 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005166920 (1)	1421 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI63934 (1)	1491 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:ABC59719 (1)	1491 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI67477 (1)	1421 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAA96815 (1)	464 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH93433 (1)	258 aa	Select Tool ZFIN BLAST NCBI BLAST

col2a1a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-216K22 (1)	Genomic	GenBank:BX927144	168503	Select Tool MegaBLAST Ensembl

col2a1a ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:174994 (1)	RNA	GenBank:BC167477	5796	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI67477	1421	Select Tool ZFIN BLAST NCBI BLAST
[CDNA] MGC:195369 (1)	RNA	GenBank:BC163934	4758	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI63934	1491	Select Tool ZFIN BLAST NCBI BLAST
[EST] fb38c06 (2)	RNA	GenBank:AI437144	510	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI444422	304	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fc10c01 (2)	RNA	GenBank:AI601358	418	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI629239	402	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT