ZFIN ID: ZDB-GENE-990715-2

ZFIN ID: ZDB-GENE-990715-2

Mapping Details

Gene Name:	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
Symbol:	sema3d

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	18	10,399,534 - 10,466,921	GRCz12tu
NCBI Map Viewer	18	10,399,534 - 10,466,921	GRCz12tu
Ensembl	18	9,171,778 - 9,238,675	GRCz11
NCBI Map Viewer	18	9,171,778 - 9,238,675	GRCz11
UCSC	18	Based on NM_131048	GRCz11
Vega	18	9,213,759 - 9,280,656	GRCv10

Mapped Clones containing sema3d
CH73-91H12	Chr: 18 Details
CH1073-181J18	Chr: 18 Details
CH1073-455M18	Chr: 18 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
mu268	18	9,186,447 - 9,186,460	GRCz11	DIRECT	Hamm et al., 2016
sa1661	18	10,440,875	GRCz12tu	DIRECT	Sealy et al., 2025
	18	9,212,625	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	18	9,254,606	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	18	8,677,228	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa15069	18	10,457,428	GRCz12tu	DIRECT	Sealy et al., 2025
	18	9,271,159	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	18	8,693,781	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa19196	18	10,414,775	GRCz12tu	DIRECT	Sealy et al., 2025
	18	9,186,525	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	18	9,228,506	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	18	8,651,128	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa28980	18	10,440,978	GRCz12tu	DIRECT	Sealy et al., 2025
	18	9,212,728	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	18	9,254,709	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	18	8,677,331	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa30702	18	10,414,695	GRCz12tu	DIRECT	Sealy et al., 2025
	18	9,186,445	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	18	9,228,426	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	18	8,651,048	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa36576	18	10,414,683	GRCz12tu	DIRECT	Sealy et al., 2025
	18	9,186,433	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	18	9,228,414	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	18	8,651,036	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa43051	18	10,444,607	GRCz12tu	DIRECT	Sealy et al., 2025
	18	9,216,357	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	18	9,258,338	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	18	8,680,960	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa44882	18	10,457,293	GRCz12tu	DIRECT	Sealy et al., 2025
	18	9,229,043	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	18	9,271,024	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	18	8,693,646	Zv9	DIRECT	Busch-Nentwich et al., 2013
la020551Tg	18	8,674,276 - 8,674,286	Zv9	ZFIN_Zv9
	18		GRCz11	OTHER_MAPPING	ZFIN Curated Data
mu268	18		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
18	32.3 cM	sema3d	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION: No data available