ZFIN ID: ZDB-GENE-070129-1

Mapping Details

Gene Name: potassium inwardly rectifying channel subfamily J member 13
Symbol: kcnj13
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 15 42,938,240 - 42,992,755 GRCz12tu
NCBI Map Viewer 15 42,938,240 - 42,992,755 GRCz12tu
Ensembl 15 40,217,256 - 40,267,485 GRCz11
NCBI Map Viewer 15 40,214,962 - 40,238,988 GRCz11
UCSC 15 - GRCz11
UCSC 15 - GRCz11
UCSC 15 - GRCz11
UCSC 15 - GRCz11
UCSC 15 - GRCz11
Vega 15 40,376,385 - 40,392,767 GRCv10
Vega 15 40,370,204 - 40,420,433 GRCv10
Mapped Clones containing kcnj13
DKEY-246M18 Chr: 15 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
pu107 15 40,226,965 - 40,226,999 GRCz11 DIRECT Silic et al., 2020
pu108 15 40,226,962 - 40,227,001 GRCz11 DIRECT Silic et al., 2020
pu109 15 40,226,964 - 40,226,977 GRCz11 DIRECT Silic et al., 2020
pu110 15 40,226,964 - 40,226,992 GRCz11 DIRECT Silic et al., 2020
pu111 15 40,226,964 - 40,227,002 GRCz11 DIRECT Silic et al., 2020
sa13246 15 42,940,742 GRCz12tu DIRECT Sealy et al., 2025
15 40,221,097 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 40,374,045 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 38,858,258 Zv9 DIRECT Busch-Nentwich et al., 2013
t24ui 15 40,226,720 - 40,226,721 GRCz11 DIRECT Podobnik et al., 2020
wpr24e1 15 40,226,687 GRCz11 DIRECT Silic et al., 2020
la010128Tg 15 38,861,452 - 38,861,462 Zv9 ZFIN_Zv9 BurgessLin
a288 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
db230 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
dhi2059Tg 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
dmh1 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
dmh9 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
dt58ui 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
la010128Tg 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
pu107 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
pu108 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
pu109 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
pu110 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
pu111 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa13246 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
t24ui 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tc271d 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING directMappedMarker
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING paneledMarkersDirect
td15 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
txg6 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
ty7 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
wpr24e1 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z53177 SSLP 15 Iwashita et al., 2006 Iwashita et al. (2006) linked kcnj13 to LG 15 between z26441 (73.2cM) and  ...
z26441 SSLP 15 Iwashita et al., 2006 Iwashita et al. (2006) linked kcnj13 to LG 15 between z26441 (73.2cM) and  ...

OTHER MAPPING INFORMATION
Chr 15 Iwashita et al., 2006 Iwashita et al. (2006) linked kcnj13 to LG 15 between z26441 (73.2cM) and z53177 (79.6cM).
Genomic Feature tc271d is an allele of kcnj13
Chr Location Mapped As Panel Mapped By Scoring
15 75.6 cM tc271d Boston MGH Cross (MGH) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
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