ZFIN Mapping: vps11

ZFIN ID: ZDB-GENE-050731-5

Gene Name:	VPS11 core subunit of CORVET and HOPS complexes
Symbol:	vps11

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	10	29,751,029 - 29,768,556	GRCz11
Ensembl	10	29,751,029 - 29,768,556	GRCz11
Vega	10	29,864,689 - 29,882,216	GRCv10
NCBI Map Viewer	10	29,750,952 - 29,768,526	GRCz11
UCSC	10	-	GRCz11

Mapped Clones containing vps11
CH73-261I21	Chr: 10 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa6174	10	29,759,232	GRCz11	Busch-Nentwich et al., 2013
	10	29,872,892	GRCz10	Busch-Nentwich et al., 2013
	10	30,650,488	Zv9	Busch-Nentwich et al., 2013
sa12276	10	29,768,360	GRCz11	Busch-Nentwich et al., 2013
	10	29,882,020	GRCz10	Busch-Nentwich et al., 2013
	10	30,659,616	Zv9	Busch-Nentwich et al., 2013
sa34930	10	29,754,516	GRCz11	Busch-Nentwich et al., 2013
	10	29,868,176	GRCz10	Busch-Nentwich et al., 2013
	10	30,645,772	Zv9	Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Publication / Person	Comments
z9574	SSLP	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z7504	SSLP	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z25833	SSLP	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.
dlg2	GENE	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.
wsu1	Feature	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.

Chr 10

Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 ...

Genomic Feature wsu1 is an allele of vps11

Marker	Type	Chr	Publication / Person	Comments
dlg2	GENE	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.
vps11	GENE	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z9574	SSLP	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z7504	SSLP	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z25833	SSLP	10	Thomas et al., 2011	Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 (platinum) to Chr 10 by bulk segregant analysis.

Genomic Feature wsu1 is an allele of vps11

Chr 10

Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11^wsu1 ...

Mapping Details