ZFIN ID: ZDB-GENE-050731-5

Mapping Details

Gene Name: VPS11 core subunit of CORVET and HOPS complexes
Symbol: vps11
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 10 34,676,545 - 34,694,138 GRCz12tu
NCBI Map Viewer 10 34,676,545 - 34,694,138 GRCz12tu
Ensembl 10 29,751,029 - 29,768,556 GRCz11
NCBI Map Viewer 10 29,750,952 - 29,768,526 GRCz11
UCSC 10 - GRCz11
Vega 10 29,864,689 - 29,882,216 GRCv10
Mapped Clones containing vps11
CH73-261I21 Chr: 10 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa6174 10 34,684,844 GRCz12tu DIRECT Sealy et al., 2025
10 29,759,232 GRCz11 DIRECT Busch-Nentwich et al., 2013
10 29,872,892 GRCz10 DIRECT Busch-Nentwich et al., 2013
10 30,650,488 Zv9 DIRECT Busch-Nentwich et al., 2013
sa12276 10 34,693,972 GRCz12tu DIRECT Sealy et al., 2025
10 29,768,360 GRCz11 DIRECT Busch-Nentwich et al., 2013
10 29,882,020 GRCz10 DIRECT Busch-Nentwich et al., 2013
10 30,659,616 Zv9 DIRECT Busch-Nentwich et al., 2013
sa34930 10 34,680,128 GRCz12tu DIRECT Sealy et al., 2025
10 29,754,516 GRCz11 DIRECT Busch-Nentwich et al., 2013
10 29,868,176 GRCz10 DIRECT Busch-Nentwich et al., 2013
10 30,645,772 Zv9 DIRECT Busch-Nentwich et al., 2013
wsu1 10 GRCz11 GENERAL_LOAD load data [singleton]
sa6174 10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa12276 10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa34930 10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
w66 10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
wsu1 10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
10 GRCz11 OTHER_MAPPING linkagesDirectMem1
10 GRCz11 OTHER_MAPPING linkagesDirectMem2
wsu3 10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z9574 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z7504 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z25833 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
dlg2 GENE 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
wsu1 Feature 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.

OTHER MAPPING INFORMATION
Chr 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1  ...
Genomic Feature wsu1 is an allele of vps11
Marker Type Chr Distance Publication / Person Comments
dlg2 GENE 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
vps11 GENE 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z9574 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z7504 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z25833 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
Genomic Feature wsu1 is an allele of vps11
Chr 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1  ...
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