Mapping Details

Genome Browser Chr Position Assembly ZFIN JBrowse 1 47,414,734 - 47,431,453 GRCz11 Ensembl 1 47,414,734 - 47,431,453 GRCz11 Vega 1 46,723,502 - 46,740,221 GRCv10 NCBI Map Viewer 1 47,414,734 - 47,431,453 GRCz11 UCSC 1 - GRCv10

Mapped Clones containing gja5b
CH73-191D11	Chr: 1 Details
CH1073-229O2	Chr: 1 Details

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
bcl9l	GENE	unknown		Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically  ... Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. The zebrafish genome has two clusters that represent duplicate copies of the human CX40 and CX50 genes. The cx44.1, cx41.8 and bcl9 genes are physically linked and this order is seen in the human genome as well.
gja8b	GENE	unknown		Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically  ... Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. The zebrafish genome has two clusters that represent duplicate copies of the human CX40 and CX50 genes. The cx44.1, cx41.8 and bcl9 genes are physically linked and this order is seen in the human genome as well.

OTHER MAPPING INFORMATION

Chr 1 ZFIN Curated Data ZFIN historical data ZFIN historical data   Chr unknown Eastman et al., 2006 Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. The  ... Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. The zebrafish genome has two clusters that represent duplicate copies of the human CX40 and CX50 genes. The cx44.1, cx41.8 and bcl9 genes are physically linked and this order is seen in the human genome as well.

Genomic Feature t1 is an allele of gja5b
Chr Location Mapped As Panel Mapped By Scoring 1 47.4 cM t1 Boston MGH Cross (MGH) Geisler, Robert Data Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Genomic Feature t1 is an allele of gja5b
Marker Type Chr Distance Publication / Person Comments z9704 SSLP 1 0.2 cM Watanabe et al., 2006 Watanabe, et al. (2006. EMBO Rep. 7:893-897) reports mapping t1 to LG1 near  ... Watanabe, et al. (2006. EMBO Rep. 7:893-897) reports mapping t1 to LG1 near z9704.

Genomic Feature t1 is an allele of gja5b
Chr 1 Postlethwait et al., 1994 Postlethwait, et al. (1994. Science 264:699-703.) mapped the leopard mutation (allele: t1) to LG01  ... Postlethwait, et al. (1994. Science 264:699-703.) mapped the leopard mutation (allele: t1) to LG01 on the MOP panel.