ZFIN ID: ZDB-GENE-040621-2

Mapping Details

Gene Name: VANGL planar cell polarity protein 1
Symbol: vangl1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 9 34,674,291 - 34,743,763 GRCz12tu
NCBI Map Viewer 9 34,674,291 - 34,743,763 GRCz12tu
Ensembl 9 33,009,284 - 33,055,440 GRCz11
NCBI Map Viewer 9 32,988,276 - 33,057,747 GRCz11
UCSC 9 - GRCz11
Vega 9 33,198,538 - 33,244,694 GRCv10
Mapped Clones containing vangl1
CH211-39H10 Chr: 9 Details
CH211-125E6 Chr: 9 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa13010 9 34,728,400 GRCz12tu DIRECT Sealy et al., 2025
9 33,042,384 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,231,638 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,075,692 Zv9 DIRECT Busch-Nentwich et al., 2013
sa15707 9 34,728,199 GRCz12tu DIRECT Sealy et al., 2025
9 33,042,183 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,231,437 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,075,491 Zv9 DIRECT Busch-Nentwich et al., 2013
sa16745 9 34,728,625 GRCz12tu DIRECT Sealy et al., 2025
9 33,042,609 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,231,863 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,075,917 Zv9 DIRECT Busch-Nentwich et al., 2013
sa34683 9 34,730,063 GRCz12tu DIRECT Sealy et al., 2025
9 33,044,047 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,233,301 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,077,355 Zv9 DIRECT Busch-Nentwich et al., 2013
sa41461 9 34,738,904 GRCz12tu DIRECT Sealy et al., 2025
9 33,052,888 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,242,142 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,086,196 Zv9 DIRECT Busch-Nentwich et al., 2013
sa13010 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa15707 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa16745 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa34683 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa41461 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z559 SSLP 9 Jessen et al., 2004 Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9  ...
z13213 SSLP 9 Jessen et al., 2004 Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9  ...
casq2 GENE 9 Jessen et al., 2004 Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9  ...

OTHER MAPPING INFORMATION
Chr 9 Jessen et al., 2004 Jessen JR et al (Gene Exp Patterns 4, 339-344) mapped the vangl1 gene to LG 9 adjacent to the casq2  ...
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