ZFIN ID: ZDB-GENE-030131-4400

Mapping Details

Gene Name: collagen, type I, alpha 1b
Symbol: col1a1b
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 12 3,484,328 - 3,521,741 GRCz12tu
NCBI Map Viewer 12 3,484,328 - 3,521,741 GRCz12tu
Ensembl 12 3,095,699 - 3,133,483 GRCz11
NCBI Map Viewer 12 3,095,699 - 3,133,481 GRCz11
UCSC 12 - GRCz11
Vega 12 3,060,966 - 3,098,750 GRCv10
Mapped Clones containing col1a1b
CH211-190L11 Chr: 12 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa12931 12 3,520,353 GRCz12tu DIRECT Sealy et al., 2025
12 3,132,093 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 3,097,360 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 3,723,840 Zv9 DIRECT Busch-Nentwich et al., 2013
sa41934 12 3,509,413 GRCz12tu DIRECT Sealy et al., 2025
12 3,120,880 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 3,086,147 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 3,712,627 Zv9 DIRECT Busch-Nentwich et al., 2013
sa45443 12 3,503,222 GRCz12tu DIRECT Sealy et al., 2025
12 3,114,676 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 3,079,943 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 3,706,423 Zv9 DIRECT Busch-Nentwich et al., 2013
dmh29 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
12 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa12931 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
12 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa41934 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa45443 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
12 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
12 7.7 cM col1a3 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Markers Encoded by col1a1b
fj59a10 Chr: 12 Details
zeh0348 Chr: 12 Details
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