ZFIN ID: ZDB-GENE-030131-274

Mapping Details

Gene Name: PRP40 pre-mRNA processing factor 40 homolog A
Symbol: prpf40a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 9 4,675,193 - 4,721,993 GRCz11
Ensembl 9 4,675,193 - 4,721,993 GRCz11
Vega 9 4,708,852 - 4,755,652 GRCv10
NCBI Map Viewer 9 4,675,193 - 4,721,974 GRCz11
UCSC 9 - GRCv10
Mapped Clones containing prpf40a
CH211-279A7 Chr: 9 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa1197 9 4,704,197 GRCz11 Busch-Nentwich et al., 2013
9 4,737,856 GRCz10 Busch-Nentwich et al., 2013
9 4,710,115 Zv9 Busch-Nentwich et al., 2013
sa13254 9 4,697,577 GRCz11 Busch-Nentwich et al., 2013
9 4,731,236 GRCz10 Busch-Nentwich et al., 2013
9 4,703,495 Zv9 Busch-Nentwich et al., 2013
sa31699 9 4,684,285 GRCz11 Busch-Nentwich et al., 2013
9 4,717,944 GRCz10 Busch-Nentwich et al., 2013
9 4,690,203 Zv9 Busch-Nentwich et al., 2013
sa41344 9 4,692,603 GRCz11 Busch-Nentwich et al., 2013
9 4,726,262 GRCz10 Busch-Nentwich et al., 2013
9 4,698,521 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
18 4654.0 cR fe47a12.x1 Goodfellow T51 (T51) Zhou, Yi Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
sp5a GENE 9 0.1 cM Tallafuss et al., 2001 Tallafuss, et al. (2001. Dev 128:4021-4034.) report mapping sp5 to LG9 approximately 0.10 cM from wu:fb18h07 close to the hoxd cluster.

OTHER MAPPING INFORMATION
Markers Encoded by prpf40a
fb18h07 Chr: 9 Details