ZFIN ID: ZDB-GENE-010328-10

Mapping Details

Gene Name:	claudin j
Symbol:	cldnj

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	15	2,678,102 - 2,679,782	GRCz12tu
NCBI Map Viewer	15	2,678,102 - 2,679,782	GRCz12tu
Ensembl	15	2,631,421 - 2,632,891	GRCz11
NCBI Map Viewer	15	2,631,211 - 2,632,891	GRCz11
UCSC	15	-	GRCz11
Vega	15	2,667,849 - 2,669,319	GRCv10
Vega	5	36,066,562 - 36,074,870	GRCv10

Mapped Clones containing cldnj
CH211-235M3	Chr: 15 Details
CH211-222C22	Chr: 5 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hi340aTg	15	2,632,193 - 2,632,194	GRCz11	DIRECT		ZFIN Curated Data
la025025Tg	5	38,267,752 - 38,267,762	Zv9	ZFIN_Zv9	BurgessLin
hi340aTg	15		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
la025025Tg	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	15		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
15	10.1 cM	cldnj	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Chr 15

Kollmar et al., 2001

Kollmar, et al. (2001. Proc Natl Acad Sci 98:10196-10201.) report mapping cldnj to LG15 on the T51 ...

Markers Encoded by cldnj
fc01e04 Chr: 5 Details
fa04h05 Chr: 5 Details