ZFIN ID: ZDB-GENE-001031-1

Mapping Details

Gene Name: paired box 6b
Symbol: pax6b
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position
ZFIN Gbrowse 7 15,871,156 - 15,900,606
Ensembl 7 15,871,156 - 15,900,606
Vega 7 15,619,410 - 15,648,344
NCBI Map Viewer 7 15,871,376 - 15,897,386
UCSC 7 -
Mapped Clones containing pax6b
DKEY-157G7 Chr: 7 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa86 7 15,882,990 GRCz11 Busch-Nentwich et al., 2013
7 15,631,017 GRCz10 Busch-Nentwich et al., 2013
7 16,648,319 Zv9 Busch-Nentwich et al., 2013
sa9552 7 15,882,104 GRCz11 Busch-Nentwich et al., 2013
7 15,630,131 GRCz10 Busch-Nentwich et al., 2013
7 16,647,433 Zv9 Busch-Nentwich et al., 2013
sa11497 7 15,882,104 GRCz11 Busch-Nentwich et al., 2013
7 15,630,131 GRCz10 Busch-Nentwich et al., 2013
7 16,647,433 Zv9 Busch-Nentwich et al., 2013
sa13392 7 15,889,106 GRCz11 Busch-Nentwich et al., 2013
7 15,637,133 GRCz10 Busch-Nentwich et al., 2013
7 16,654,435 Zv9 Busch-Nentwich et al., 2013
sa15822 7 15,882,866 GRCz11 Busch-Nentwich et al., 2013
7 15,630,893 GRCz10 Busch-Nentwich et al., 2013
7 16,648,195 Zv9 Busch-Nentwich et al., 2013
sa20883 7 15,890,282 GRCz11 Busch-Nentwich et al., 2013
7 15,638,309 GRCz10 Busch-Nentwich et al., 2013
7 16,655,611 Zv9 Busch-Nentwich et al., 2013
tq253a 7 15,889,258 GRCz11 Kleinjan et al., 2008
la010682Tg 7 16,643,086 - 16,643,096 Zv9
la029282Tg 7 16,642,698 - 16,642,708 Zv9

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
7 53.5 cM pax6b Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
smb416Et Feature 7 Kikuta et al., 2007 Et(CLG-YFP)smb5 and Et(CLG-YFP)smb416 were mapped to intron 3 of pax6b on LG7.
smb5Et Feature 7 Kikuta et al., 2007 Et(CLG-YFP)smb5 and Et(CLG-YFP)smb416 were mapped to intron 3 of pax6b on LG7.
igf1rb GENE 7 4.71 cR Schlueter et al., 2006 Schlueter PJ et al (FASEB J., 20(8):1230-1232) mapped the igf1rb gene to LG7  ...

OTHER MAPPING INFORMATION
Chr 7 Kikuta et al., 2007 Et(CLG-YFP)smb5 and Et(CLG-YFP)smb416 were mapped to intron 3 of pax6b on LG7.
Markers Encoded by pax6b
fc09c10 Chr: 7 Details
fc33g08 Chr: 7 Details
Genomic Feature tq253a is an allele of pax6b
Marker Type Chr Distance Publication / Person Comments
z20963 SSLP 7 Kleinjan et al., 2008 Kleinjan et al. (2008. PLoS Genet. 4(2): e29) report mapping the sri mutation  ...
z11085 SSLP 7 Kleinjan et al., 2008 Kleinjan et al. (2008. PLoS Genet. 4(2): e29) report mapping the sri mutation  ...
Genomic Feature tq253a is an allele of pax6b
Chr 7 Kleinjan et al., 2008 Kleinjan et al. (2008. PLoS Genet. 4(2): e29) report mapping the sri mutation to between 29.7cM  ...