ZFIN ID: ZDB-GENE-050616-11

Mapping Details

Gene Name: gap junction protein, alpha 5b
Symbol: gja5b
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 1 47,414,734 - 47,431,453 GRCz11
Ensembl 1 47,414,734 - 47,431,453 GRCz11
Vega 1 46,723,502 - 46,740,221 GRCv10
NCBI Map Viewer 1 47,414,734 - 47,431,453 GRCz11
UCSC 1 - GRCz11
Mapped Clones containing gja5b
CH73-191D11 Chr: 1 Details
CH1073-229O2 Chr: 1 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
dtk3 1 47,416,387 GRCz11 Irion et al., 2014
dtnr16 1 47,416,644 GRCz11 Irion et al., 2014
dtnz 1 47,416,606 GRCz11 Irion et al., 2014
dtq270 1 47,416,234 GRCz11 Watanabe et al., 2006
dtw28 1 47,416,750 GRCz11 Irion et al., 2014
sa19565 1 47,416,331 GRCz11 Busch-Nentwich et al., 2013
1 46,725,099 GRCz10 Busch-Nentwich et al., 2013
1 47,913,438 Zv9 Busch-Nentwich et al., 2013
sa19566 1 47,430,775 GRCz11 Busch-Nentwich et al., 2013
1 46,739,543 GRCz10 Busch-Nentwich et al., 2013
1 47,927,882 Zv9 Busch-Nentwich et al., 2013
t1 1 47,416,639 GRCz11 Irion et al., 2014

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
bcl9l GENE unknown Eastman et al., 2006 Eastman et al (Genomics 87(2):265-274) identified clusters of physically  ...
gja8b GENE unknown Eastman et al., 2006 Eastman et al (Genomics 87(2):265-274) identified clusters of physically  ...

OTHER MAPPING INFORMATION
Chr 1 ZFIN Curated Data ZFIN historical data
Chr unknown Eastman et al., 2006 Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. The  ...
Genomic Feature t1 is an allele of gja5b
Chr Location Mapped As Panel Mapped By Scoring
1 47.4 cM t1 Boston MGH Cross (MGH) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
Genomic Feature t1 is an allele of gja5b
Marker Type Chr Distance Publication / Person Comments
z9704 SSLP 1 0.2 cM Watanabe et al., 2006 Watanabe, et al. (2006. EMBO Rep. 7:893-897) reports mapping t1 to LG1 near  ...
Genomic Feature t1 is an allele of gja5b
Chr 1 Postlethwait et al., 1994 Postlethwait, et al. (1994. Science 264:699-703.) mapped the leopard mutation (allele: t1) to LG01  ...
Genomic Feature to29 is an allele of gja5b