ZFIN ID: ZDB-GENE-030219-38

Mapping Details

Gene Name: COPI coat complex subunit beta 1
Symbol: copb1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 7 27,826,473 - 27,847,404 GRCz12tu
NCBI Map Viewer 7 27,826,473 - 27,847,404 GRCz12tu
Ensembl 7 27,802,480 - 27,820,976 GRCz11
NCBI Map Viewer 7 27,802,523 - 27,820,218 GRCz11
UCSC 7 - GRCz11
Vega 7 27,531,287 - 27,549,783 GRCv10
Mapped Clones containing copb1
CH211-77A11 Chr: 7 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa20952 7 27,832,247 GRCz12tu DIRECT Sealy et al., 2025
7 27,807,956 GRCz11 DIRECT Busch-Nentwich et al., 2013
7 27,536,763 GRCz10 DIRECT Busch-Nentwich et al., 2013
7 28,933,824 Zv9 DIRECT Busch-Nentwich et al., 2013
sa34079 7 27,829,592 GRCz12tu DIRECT Sealy et al., 2025
7 27,805,328 GRCz11 DIRECT Busch-Nentwich et al., 2013
7 27,534,135 GRCz10 DIRECT Busch-Nentwich et al., 2013
7 28,931,196 Zv9 DIRECT Busch-Nentwich et al., 2013
sa34080 7 27,832,245 GRCz12tu DIRECT Sealy et al., 2025
7 27,807,954 GRCz11 DIRECT Busch-Nentwich et al., 2013
7 27,536,761 GRCz10 DIRECT Busch-Nentwich et al., 2013
7 28,933,822 Zv9 DIRECT Busch-Nentwich et al., 2013
tm285 7 27,811,744 GRCz11 DIRECT Coutinho et al., 2004
la025944Tg 7 28,929,060 - 28,929,070 Zv9 ZFIN_Zv9 BurgessLin
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa3636 7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa20952 7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa34079 7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa34080 7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
tc229 7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
te239 7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tk56a 7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
tm285 7 GRCz11 OTHER_MAPPING directMappedMarker
7 GRCz11 OTHER_MAPPING paneledMarkersDirect
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
tr278 7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
ty230 7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
7 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z20853 SSLP 7 12.9 cR Coutinho et al., 2004 Coutinho, et al. (2004. Dev. Cell 7(4):547-558) reports mapping copb1 to LG7,  ...

OTHER MAPPING INFORMATION
Markers Encoded by copb1
fc66c05 Chr: 7 Details
Genomic Feature tm285 is an allele of copb1
Chr Location Mapped As Panel Mapped By Scoring
7 45.3 cM tm285 Boston MGH Cross (MGH) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
Genomic Feature te239 is an allele of copb1
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