ZFIN ID: ZDB-GENE-070129-1

ZFIN ID: ZDB-GENE-070129-1

Mapping Details

Gene Name:	potassium inwardly rectifying channel subfamily J member 13
Symbol:	kcnj13

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	15	42,938,240 - 42,992,755	GRCz12tu
NCBI Map Viewer	15	42,938,240 - 42,992,755	GRCz12tu
Ensembl	15	40,217,256 - 40,267,485	GRCz11
NCBI Map Viewer	15	40,214,962 - 40,238,988	GRCz11
UCSC	15	-	GRCz11
UCSC	15	-	GRCz11
UCSC	15	-	GRCz11
UCSC	15	-	GRCz11
UCSC	15	-	GRCz11
Vega	15	40,376,385 - 40,392,767	GRCv10
Vega	15	40,370,204 - 40,420,433	GRCv10

Mapped Clones containing kcnj13
DKEY-246M18	Chr: 15 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
pu107	15	40,226,965 - 40,226,999	GRCz11	DIRECT	Silic et al., 2020
pu108	15	40,226,962 - 40,227,001	GRCz11	DIRECT	Silic et al., 2020
pu109	15	40,226,964 - 40,226,977	GRCz11	DIRECT	Silic et al., 2020
pu110	15	40,226,964 - 40,226,992	GRCz11	DIRECT	Silic et al., 2020
pu111	15	40,226,964 - 40,227,002	GRCz11	DIRECT	Silic et al., 2020
sa13246	15	42,940,742	GRCz12tu	DIRECT	Sealy et al., 2025
	15	40,221,097	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	15	40,374,045	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	15	38,858,258	Zv9	DIRECT	Busch-Nentwich et al., 2013
t24ui	15	40,226,720 - 40,226,721	GRCz11	DIRECT	Podobnik et al., 2020
wpr24e1	15	40,226,687	GRCz11	DIRECT	Silic et al., 2020
la010128Tg	15	38,861,452 - 38,861,462	Zv9	ZFIN_Zv9
a288	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
db230	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
dhi2059Tg	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
dmh1	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
dmh9	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
dt58ui	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
la010128Tg	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
pu107	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
pu108	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
pu109	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
pu110	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
pu111	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
t24ui	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
tc271d	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
td15	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
txg6	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
ty7	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
wpr24e1	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z53177	SSLP	15		Iwashita et al., 2006	Iwashita et al. (2006) linked kcnj13 to LG 15 between z26441 (73.2cM) and ...
z26441	SSLP	15		Iwashita et al., 2006	Iwashita et al. (2006) linked kcnj13 to LG 15 between z26441 (73.2cM) and ...

Chr 15

Iwashita et al., 2006

Iwashita et al. (2006) linked kcnj13 to LG 15 between z26441 (73.2cM) and z53177 (79.6cM).

Genomic Feature tc271d is an allele of kcnj13

Chr	Location	Mapped As	Panel	Mapped By	Scoring
15	75.6 cM	tc271d	Boston MGH Cross (MGH)	Geisler, Robert	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Genomic Feature pu109 is an allele of kcnj13