ZFIN ID: ZDB-GENE-030131-2427

Mapping Details

Gene Name: collagen, type VII, alpha 1
Symbol: col7a1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 6 42,740,103 - 42,867,488 GRCz12tu
NCBI Map Viewer 6 42,740,103 - 42,867,488 GRCz12tu
Ensembl 6 40,184,235 - 40,312,091 GRCz11
NCBI Map Viewer 6 40,184,898 - 40,312,163 GRCz11
Vega 6 40,186,699 - 40,314,555 GRCv10
Mapped Clones containing col7a1
CH211-242N18 Chr: 6 Details
DKEY-28N18 Chr: 6 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa1097 6 42,755,620 GRCz12tu DIRECT Sealy et al., 2025
6 40,200,421 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,202,885 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,131,285 Zv9 DIRECT Busch-Nentwich et al., 2013
sa12429 6 42,759,681 GRCz12tu DIRECT Sealy et al., 2025
6 40,204,484 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,206,948 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,135,348 Zv9 DIRECT Busch-Nentwich et al., 2013
sa20771 6 42,768,462 GRCz12tu DIRECT Sealy et al., 2025
6 40,213,127 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,215,591 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,143,991 Zv9 DIRECT Busch-Nentwich et al., 2013
sa20772 6 42,771,868 GRCz12tu DIRECT Sealy et al., 2025
6 40,216,533 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,218,997 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,147,397 Zv9 DIRECT Busch-Nentwich et al., 2013
sa20773 6 42,777,194 GRCz12tu DIRECT Sealy et al., 2025
6 40,221,859 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,224,323 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,152,723 Zv9 DIRECT Busch-Nentwich et al., 2013
sa26794 6 42,756,642 GRCz12tu DIRECT Sealy et al., 2025
6 40,201,445 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,203,909 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,132,309 Zv9 DIRECT Busch-Nentwich et al., 2013
sa31533 6 42,791,822 GRCz12tu DIRECT Sealy et al., 2025
6 40,236,487 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,238,951 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,167,351 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33920 6 42,764,699 GRCz12tu DIRECT Sealy et al., 2025
6 40,209,364 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,211,828 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,140,228 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33921 6 42,775,798 GRCz12tu DIRECT Sealy et al., 2025
6 40,220,463 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,222,927 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,151,327 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33922 6 42,792,875 GRCz12tu DIRECT Sealy et al., 2025
6 40,237,540 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,240,004 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,168,404 Zv9 DIRECT Busch-Nentwich et al., 2013
sa38571 6 42,771,869 GRCz12tu DIRECT Sealy et al., 2025
6 40,216,534 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,218,998 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,147,398 Zv9 DIRECT Busch-Nentwich et al., 2013
sa45261 6 42,792,851 GRCz12tu DIRECT Sealy et al., 2025
6 40,237,516 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 40,239,980 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 40,168,380 Zv9 DIRECT Busch-Nentwich et al., 2013
mn0750Gt 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa1097 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa12429 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa20771 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa20772 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa20773 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa26794 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa31533 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa33920 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa33921 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa33922 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa38571 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa45261 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION
Markers Encoded by col7a1
fc07e08 Chr: 6 Details
Genomic Feature sa45261 is an allele of col7a1
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